Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq8 132 5e-26 seq4 116 4e-21 seq2 93.3 5e-14 >seq8 Length=1853719 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || ||||||||||| |||||||| | Sbjct 999063 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGA 999004 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||| | || | || |||||||||| |||||| |||||| ||| | Sbjct 999003 TCAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 998945 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || ||||| | || ||||| || |||||||| || || || Sbjct 998944 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 998885 Query 46583 AA 46584 || Sbjct 998884 AA 998883 >seq4 Length=3327763 Score = 116 bits (128), Expect = 4e-21 Identities = 136/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||| || || || ||||| | || || |||||||| |||||||| Sbjct 2999209 CTCCTTCTGGATATTGTAATCAGAGAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAA 2999150 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||||||| ||||||| ||| | ||| Sbjct 2999149 GATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTT-AACGT 2999091 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||||| || || || || | |||||||| || || ||||| || || | Sbjct 2999090 TGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGA 2999031 Query 46581 C 46581 | Sbjct 2999030 C 2999030 Score = 116 bits (128), Expect = 4e-21 Identities = 160/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||||||||| || | || |||||| ||||| || || || || ||||| || | Sbjct 2999461 ACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAATCCGAAAGAGTACGTCC 2999402 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||| |||||||| || | ||||||||||| | || | | |||||| Sbjct 2999401 GTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTT 2999342 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCG 46553 |||| ||||| |||||| ||| | | | ||||| |||| || || || | || Sbjct 2999341 GTCCTGAATCTTGCTCTTGA-CGTTGTCAATGGTGTCTGAGCTC---TCAACCTCGAGCG 2999286 Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || ||||| || || || || || || |||||||| Sbjct 2999285 TGATAGTCTTGCCAGTGAGTGTCTTCACGAAAATTTGCAT 2999246 Score = 113 bits (124), Expect = 5e-20 Identities = 128/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||| || || || ||||| | || || |||||||| |||||||| Sbjct 2998920 CTCCTTCTGGATATTGTAATCAGAGAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAA 2998861 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||||||| ||||||| ||| | ||| Sbjct 2998860 GATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTT-AACGT 2998802 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || ||||| || || || || | |||||||| ||||| || Sbjct 2998801 TGTCGATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 2998753 >seq2 Length=4573486 Score = 93.3 bits (102), Expect = 5e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| | || |||||||||||||||||||| Sbjct 2591705 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 2591764 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| |||||| ||||| | || | | ||||||||| Sbjct 2591765 GATCAGGCGCTGTTGGTCAGGGGGAATACCCTCCTTGTC 2591803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237757041320