Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 143 3e-28 seq6 104 3e-16 seq1 104 3e-16 >seq3 Length=4213559 Score = 143 bits (158), Expect = 3e-28 Identities = 177/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 3367736 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 3367795 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 3367796 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 3367855 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||| ||||||| |||||| || || ||||||||||| Sbjct 3367856 AGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCGAGC 3367915 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | || ||| ||||| | |||||| |||||||||| |||||| Sbjct 3367916 AGAGCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCAACGATG 3367975 Query 868931 AT 868932 || Sbjct 3367976 AT 3367977 Score = 134 bits (148), Expect = 2e-25 Identities = 289/435 (66%), Gaps = 8/435 (2%) Strand=Plus/Plus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| ||| ||||| ||||||||||||| | || | ||||||||||||| |||||| Sbjct 881736 ACTCGACAATCTCAGTGCACAGGTTGGAGCTGCGAA-TAGTACCCAGGTTCTTCTGGTTA 881794 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | || |||| || ||||||| ||||||| |||| || |||||| |||| ||| Sbjct 881795 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCC 881854 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCTNN 1628337 | | ||||| |||||| || | || | || ||| ||| | ||||||| Sbjct 881855 TCAAGAATGGCGTACCAGAGCTTCTGAGC---CTTGATGGTCTTGCGGCCACGGCCCTCC 881911 Query 1628338 NNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGC 1628397 || || | | |||||| || ||| ||||| Sbjct 881912 TGCTCGTACTTCACGTAGAGAGCATCGAATTCATCACCGTAGACATCAGCCAGACCGGGG 881971 Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGG 1628457 |||||| || || ||||| | |||||| || || | | | || ||||||||| Sbjct 881972 GCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATAAAGAGA 882031 Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517 || ||||||| ||||| |||||||| || || || ||||||||| ||||||||| Sbjct 882032 TCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTC 882091 Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577 || |||||||| | |||| | |||||||||||||||||||||||| |||||| Sbjct 882092 TTCCGCAGGTCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAT 882151 Query 1628578 GCGCCCTTGCGCTTG 1628592 || || ||||||| Sbjct 882152 GCACCAGGGCGCTTG 882166 Score = 125 bits (138), Expect = 9e-23 Identities = 185/260 (71%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| | | ||| Sbjct 3368390 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGATCTGG 3368449 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| || ||||||||| ||||||||| Sbjct 3368450 ACCTCGGAACTGAAACGCTCGACGAGGTTCTCGTTGACAATGCCGTCGGAGGCGGCGAAG 3368509 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || ||||||||||| ||| |||| ||||| |||||| | | ||| ||||| | Sbjct 3368510 AAGGCCAGGACGTGGGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCG 3368569 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || | ||| || | ||||||||| ||||||| ||||| |||||||| ||| Sbjct 3368570 TGAAGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCTTCGGCCTTCTTG 3368629 Query 869870 TACATCTCCCATACTTGCTG 869889 ||||| | ||| || || || Sbjct 3368630 TACATTTGCCAGACCTGTTG 3368649 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||| | || || ||| | || ||||| | || |||||| | || || ||| Sbjct 208938 GCTGCCAACTACTTGGATATTAAGGCCCTCCTCGACGTCGGCTGCAAGACCGTCGCTAAC 208879 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || |||||||||||||||||||| |||||| || Sbjct 208878 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 208828 Score = 98.7 bits (108), Expect = 1e-14 Identities = 139/195 (71%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||||| || ||| || | ||| || ||||| ||||| ||||| Sbjct 3368050 ACCCTCGTCACGAGAGATCAACTCATTGGAGAAAGTGAGACCAGGCATAAGGCCACGCTT 3368109 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| ||||||| | ||| ||| ||||| ||||| |||||||| ||||| || Sbjct 3368110 CTTCAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCGGCGAA 3368169 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTG---TCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355 | | | || ||| || ||||| ||| || | |||||||||||| | || Sbjct 3368170 GGCAACCAGACGCGAAGCGAAGGTTGACTCGCGGTC------GTTGATCCACTTGAGGGC 3368223 Query 869356 CCAGTCGGCCTTTTT 869370 ||||| ||||| || Sbjct 3368224 CCAGTTAGCCTTCTT 3368238 >seq6 Length=2224657 Score = 104 bits (114), Expect = 3e-16 Identities = 118/157 (75%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || || ||| ||||||||||| | || || |||||| Sbjct 597116 GACAGCATCGGTGGAACCGTAACATGTGTGATCCGCAACGTGCCAGTTGGACTTGGCGAG 597057 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| || ||| | || || ||||| |||||| ||||| ||||| || ||| Sbjct 597056 CCCTGCTTCGATAAGCTTGAAGCTAAGCTCGGCCACGCGATGCTCAGCATCCCCGCGACC 596997 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 596996 AAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCG 596960 Score = 96.9 bits (106), Expect = 4e-14 Identities = 214/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 18099 TGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCC 18158 ||||||||| ||| | ||||||||| ||| |||| || || ||| || | Sbjct 597802 TGGCGAGTCCCACTGTCGCTCCGTCGGCTGTATCGTCGATGGATGTCCTCCGGGCCTAGA 597743 Query 18159 ACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACT 18218 ||| | |||||||||||||||||||| || |||||||| || ||||| |||| || Sbjct 597742 ACTCACTGAGGCCGACATCCAGCCTCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCT 597683 Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278 | | || ||||| ||||| || || ||| |||||||| ||||| ||| ||| | Sbjct 597682 TACTACCCCGCGAGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGTAT 597623 Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338 ||| || ||| | || | | | | | || ||| || ||||| || ||||| Sbjct 597622 CACTCTGGGCACACCAATTGCCATGGTCGTCCGCAATGAGGATCAGCGTCCTAAGGACTA 597563 Query 18339 TTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTACATGG 18391 | ||| | ||| || || | ||||| || ||||||| ||||||| | | Sbjct 597562 CGGCAACA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGACTTCACCTACCTTG 597504 Query 18392 CCAAGTACGGCATCAAGGC 18410 ||||||||| ||||||| Sbjct 597503 AGAAGTACGGCGTCAAGGC 597485 >seq1 Length=5141995 Score = 104 bits (114), Expect = 3e-16 Identities = 250/370 (68%), Gaps = 19/370 (5%) Strand=Plus/Plus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 || || || | |||||||| | |||||||| || | || | | |||||||||||| Sbjct 3628033 TGGGGGTGCGAGGCGGCGCCAATGGCGTCGATAGCGACAGTCAGGTTACCGTCGGTGCCG 3628092 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| | ||||||| | | ||| |||| || | ||||||||| | |||| |||| Sbjct 3628093 TTCTTGTAACCGATGGGGAAGGACAGACCCGAGGCGAGCTCGCGGTGAAGCTGGGACTCG 3628152 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA---AATAAGGGGCCACC 1726861 || ||||| ||||| | |||||| | | ||||||||||| | | ||||| Sbjct 3628153 GTGGTGCGGGCGCCGATTGCGCCCAGAGAGATCAGGTCTGCCAGGTACTGAGGGG----- 3628207 Query 1726862 AGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCA 1726919 ||| || | ||| | |||| ||| | ||| | || ||| | | || ||| Sbjct 3628208 AGATGGTGTCGAGCATCTCGGAGGCGATGGGGAG-TC--CGGTGCTGGTCAGGTCGGTGT 3628264 Query 1726920 ACAG---GCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGG 1726976 |||| ||| | ||||| ||| || | | | | | | | | |||||| |||| Sbjct 3628265 ACAGCTTACGG-GAGACGC--GCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATATCGG 3628321 Query 1726977 GGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCA 1727036 |||| || ||| |||||||| || || || ||||| ||||| || | ||||| |||| Sbjct 3628322 GGTCATTGATCAGTCCCTTCCAGCCAACTGTTGTGCGGGGCTTCTCCAGGTAGGCACGCA 3628381 Query 1727037 TGACCACGCA 1727046 ||| |||||| Sbjct 3628382 TGATCACGCA 3628391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107131732113847