Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 140 5e-27 seq1 98.7 2e-14 >seq3 Length=4213559 Score = 140 bits (154), Expect = 5e-27 Identities = 291/437 (67%), Gaps = 12/437 (3%) Strand=Plus/Plus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| ||| | ||| ||||||||||||| | || | || |||||||||| |||||| Sbjct 881736 ACTCGACAATCTCAGTGCACAGGTTGGAG--CTGCGAATAGTACCCAGGTTCTTCTGGTT 881793 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 || || |||| || ||||||| |||||| |||| ||| |||||| |||| || Sbjct 881794 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGC 881853 Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCT 2071747 | | ||||| |||| | || | || || | || ||| ||||||| Sbjct 881854 CTCAAGAATGGCGTACCAGA----GCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCT 881909 Query 2071748 NNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGG 2071807 |||| || || || | | |||| | || ||| |||| Sbjct 881910 CCTGCTCGTACTTCACGTAGAGAGCATCGAATTCATCACCGTAGACATCAGCCAGACCGG 881969 Query 2071808 GCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACA 2071867 | |||||| ||||| ||||| | |||||| ||| | | | || || |||||| | Sbjct 881970 GGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATAAAGA 882029 Query 2071868 GGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 2071927 | ||| ||||||| |||| ||||| || || || || ||||||||| ||||||| Sbjct 882030 GATCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGT 882089 Query 2071928 TCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 2071987 |||| ||||||||| | |||| || |||||||||||||||||||||||| ||||| Sbjct 882090 TCTTCCGCAGGTCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 882149 Query 2071988 AGGCGCCCTTGCGCTTG 2072004 | || || ||||||| Sbjct 882150 ATGCACCAGGGCGCTTG 882166 Score = 140 bits (154), Expect = 5e-27 Identities = 181/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 3367728 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 3367787 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| ||||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 3367788 GGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGA 3367847 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||||||||||| |||||||| |||||||||| |||||| || || ||||| Sbjct 3367848 GGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCA 3367907 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| || || ||| || | || | | ||||| | |||||| ||||||||| Sbjct 3367908 TGCCGAGCAGAGCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCT 3367967 Query 794131 CGATGATGAT 794140 | | |||||| Sbjct 3367968 CAACGATGAT 3367977 Score = 114 bits (126), Expect = 2e-19 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||| | || || ||| |||||||||| | || ||||||||||| || ||| Sbjct 208938 GCTGCCAACTACTTGGATATTAAGGCCCTCCTCGACGTCGGCTGCAAGACCGTCGCTAAC 208879 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| || ||||| |||||||||||||| |||||| || Sbjct 208878 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 208828 Score = 93.3 bits (102), Expect = 7e-13 Identities = 136/192 (71%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| |||||| || ||| || ||| || ||||| ||||| ||||| Sbjct 3368050 ACCCTCGTCACGAGAGATCAACTCATTGGAGAAAGTGAGACCAGGCATAAGGCCACGCTT 3368109 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| ||||| ||||||| ||| ||| ||||| ||||| |||||||| ||||| || Sbjct 3368110 CTTCAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCGGCGAA 3368169 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | || || ||| || || || | || || |||||||||||| | ||||| Sbjct 3368170 GGCAACCAGACGCGAAGCGAAGGTTGACTCGCGGTC---GTTGATCCACTTGAGGGCCCA 3368226 Query 794520 CTCTGCCTTTTT 794531 | ||||| || Sbjct 3368227 GTTAGCCTTCTT 3368238 Score = 91.5 bits (100), Expect = 2e-12 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| |||||||||||| || || ||||||||||| ||||||||||| || || Sbjct 3368348 GGCTCCTTGATGTAGGTGTCGATAAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATC 3368407 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 |||||||||||| || ||||| Sbjct 3368408 ATGATCTGGAAGCCGTAGAAGCA 3368430 >seq1 Length=5141995 Score = 98.7 bits (108), Expect = 2e-14 Identities = 121/163 (74%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || |||||||| ||||| |||||||||||| ||||||| || ||| | | Sbjct 2491032 GTACTTGGTCACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCCAGCTCACCGGGGAG 2490973 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || ||||| | |||||| ||||| |||| | ||| ||| |||||| || | Sbjct 2490972 GATGAGACGCACAGAGGTCTGAATCTCTCGGGAGGAGATGGTGGACTTCTTGTT-GTAAG 2490914 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632 | || || | ||||||||| ||| || |||| ||||| Sbjct 2490913 CAGCAAGCTTGGAGGCCTCGGTAGCGACACGCTCGAAGATGTC 2490871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916236719914949