Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3 131 2e-25 seq4 120 3e-22 seq8 113 4e-20 >seq3 Length=4213559 Score = 131 bits (144), Expect = 2e-25 Identities = 339/510 (66%), Gaps = 19/510 (4%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || ||||| || ||||| ||| || ||| | Sbjct 3367741 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTC 3367800 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| |||| ||| | ||| | || ||||| Sbjct 3367801 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 3367860 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || |||||||||||||||||||| || | ||||||||| |||| | Sbjct 3367861 GCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCGAGCAGAG- 3367919 Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 | | || || || | || | ||||||| ||| ||| | || ||||| || || | Sbjct 3367920 CGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCAACGATGATAG 3367979 Query 120590 ------CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGC 120643 | | | ||| || | |||| ||| | ||| | | | | ||| | Sbjct 3367980 CCTCAACCACCTTAGGGT--CAGGGC----GGTGGTTCATGTGGG---AGAACAGCAGAC 3368030 Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703 | || || || ||||| || |||||||| || || |||| ||| ||| || || || | Sbjct 3368031 AGGCGAAATCTGTGTGGAGACCCTCGTCACGAGAGATCAACTCATTGGAGAAAGTGAGAC 3368090 Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763 | ||||| | ||| | |||| | |||| |||| ||| || ||| || ||||| | Sbjct 3368091 CAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGA 3368150 Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-GTCG 120822 ||||| || ||| ||||| |||| ||| || || || | | || | | || | Sbjct 3368151 TACCCTCGACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGGTTGAC-TCGCGGTCGTTG 3368209 Query 120823 ATCCACTTCATGGCCCACTCGGCCTTTTTG 120852 |||||||| | |||||| | ||||| ||| Sbjct 3368210 ATCCACTTGAGGGCCCAGTTAGCCTTCTTG 3368239 >seq4 Length=3327763 Score = 120 bits (132), Expect = 3e-22 Identities = 141/188 (75%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| ||||||||||| | ||| | | | ||||| |||||||| || Sbjct 2999214 GTGGACTCCTTCTGGATATTGTAATCAGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTTCC 2999156 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||||||||| ||||| |||||||| |||||| ||| Sbjct 2999155 GGCGAAGATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTT 2999096 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || ||| ||| ||| || || | ||||| ||| || |||||||| || Sbjct 2999095 AACGTTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTTCCGGTCAGGGT 2999036 Query 133643 TTTTACGA 133650 || |||| Sbjct 2999035 CTTGACGA 2999028 Score = 109 bits (120), Expect = 5e-19 Identities = 130/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| ||||||||||| | ||| | | | ||||| |||||||| || Sbjct 2998925 GTGGACTCCTTCTGGATATTGTAATCAGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTTCC 2998867 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||||||||| ||||| |||||||| |||||| ||| Sbjct 2998866 GGCGAAGATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTT 2998807 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | | || | || ||| ||| ||| || || | ||||| ||| ||||| || Sbjct 2998806 AACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 2998753 Score = 107 bits (118), Expect = 2e-18 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || || ||||| | | | | ||| |||||| |||||||| | Sbjct 2999442 GTGGACTCCTTCTGGATGTTATAATC--CGAAAGAGTACGTCCGTCCTCCAGCTGCTTAC 2999385 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| ||||| || || |||||||| ||||| || Sbjct 2999384 CGGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCT 2999325 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||| | | ||| || |||| |||| || ||||| || || | Sbjct 2999324 TGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGTGATAGTCTTGCCAGTGAGTG 2999265 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || |||||||| |||||| Sbjct 2999264 TCTTCACGAAAATTTGCATG 2999245 >seq8 Length=1853719 Score = 113 bits (124), Expect = 4e-20 Identities = 135/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || ||| ||| | |||||||||||||| || ||| | || Sbjct 999061 TTCTGGATGTTGTAGTCGCTCAGGGTGCGACCA-TCCTCGAGCTGCTTTCCGGCGAAGAT 999003 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||||||||| || || ||||| |||||||| |||||| ||||| | || Sbjct 999002 CAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTC 998943 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| || |||| ||| | ||| || || ||||| || || ||||| Sbjct 998942 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 998883 Query 133652 A 133652 | Sbjct 998882 A 998882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420250108840