Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 205 1e-47 >seq3 Length=4213559 Score = 205 bits (226), Expect = 1e-47 Identities = 564/856 (66%), Gaps = 15/856 (2%) Strand=Plus/Plus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 |||||||||| || ||||| || || |||| |||||| || ||||||| | | Sbjct 881684 GGAAGGGCGAGAGAAGCCAGGTTGCAGACAGCAACCTCATCAGGGGCACTGTACTCGACA 881743 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||||| ||| || || ||| || |||| |||||| || || ||| || Sbjct 881744 ATCTCAGTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTG 881803 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || ||||||||||| |||||| | || | || ||||| || |||| || ||||| Sbjct 881804 TTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCAAGAATG 881863 Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 || | ||||| | || | || | | || | | | || ||||| | ||||||||| Sbjct 881864 GCGTACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCTGCTCGTACTT 881922 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 119002 |||||| || || || || ||||| | | || | || || || |||| | || Sbjct 881923 CACGTAGAGAGCATCGAATTCATCACCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGG 881982 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 ||||||||| | ||| | ||| ||||||| |||||||| ||||| || ||| |||| Sbjct 881983 GCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATAAAGAGATCGGGGGTCCA 882042 Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122 | || ||||||| || ||| |||| | || || | || || || |||| || Sbjct 882043 CAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAGGTC 882102 Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182 | || || | || ||| ||||||||||| |||||||| | || | || || | | Sbjct 882103 GAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACC---AGG 882159 Query 119183 ACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGG 119236 || |||| |||||| ||||| | || ||| ||| || ||||| ||||| || Sbjct 882160 GCGCTTGTTACCACCCTGGTCGACATAACGTGCGGTGTTGTTGAACACACGCAGCATAGG 882219 Query 119237 AATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 119296 || ||||| | ||| ||| || || || | || ||| | | || | | | Sbjct 882220 AACAATACCGTTGGAGGAGCCGTTGGTTCCACCGATGTAAGAACCAGTAGCGCGAATACG 882279 Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356 ||||| | || ||| ||||| || || ||| ||||| || || | | ||| | Sbjct 882280 GTGGACATTCAGACCGATACCACCAGCAGTCTTAGAGATCATGGCACAGGTCTTAAGAGT 882339 Query 119357 GCCGTAGATCCCATCGATCGAGTC-ACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 119415 |||| || || || || ||| | || | | | | |||||||| || | | Sbjct 882340 ATCGTAAATACCCTCAATGCTGTCGGCGCTGACGT-CAACCAGGAAGCAAGACGCAAGCT 882398 Query 119416 GAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGG 119474 | ||| ||| ||| | || ||||| | ||| || | |||||| |||| ||| | ||| Sbjct 882399 GGGGCTGGGGAGTAGCGGCATTGAACAAAGTGGGGGAGGCGTGGGTGAA-GTACTTCTGG 882457 Query 119475 GACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAG 119534 |||||| || ||| ||||| | | | ||| || || ||||| || |||| | Sbjct 882458 GACATCAAGTGGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGGATTCCGACAGCA 882517 Query 119535 ACCCGCATAAACATGT 119550 || ||||| | || || Sbjct 882518 ACACGCATCAGCAAGT 882533 Score = 141 bits (156), Expect = 1e-28 Identities = 307/457 (67%), Gaps = 18/457 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || ||| | ||| |||||| Sbjct 3367745 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 3367804 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | ||| || | | | | | || Sbjct 3367805 AAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC------AGC 3367858 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || || || | |||| ||||||||||||| ||||| || ||||||||| |||| || Sbjct 3367859 AGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCGAGCAGA 3367918 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || || || ||||| | |||| ||| ||| ||| | || || || | ||| Sbjct 3367919 GCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCAACGATGATA 3367978 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC---GGCA 130018 || | || || | | |||| | | | || | | | ||| || ||| Sbjct 3367979 GCCTCAACCACCTTAGGGTCAGGGCGGTGGTTCA---TGTGGGAGAACAGCAGACAGGCG 3368035 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || |||||||||||||||||| ||||| | ||||| ||||| ||||| ||| Sbjct 3368036 AAATCTGTGTGGAGACCCTCGTCACGAGAGATCAACTCATTGGAGAAAGTGAGACCAGGC 3368095 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || || || |||||||||| |||||| || | |||||||||||||||||||| ||| Sbjct 3368096 ATAAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCC 3368155 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 || ||| ||||| |||| |||||| ||| |||| Sbjct 3368156 TCGACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 3368192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434496529960