Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq4 194 4e-44 seq8 120 7e-22 seq3 95.1 3e-14 seq2 84.2 5e-11 >seq4 Length=3327763 Score = 194 bits (214), Expect = 4e-44 Identities = 169/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| || ||||| || || || ||||| |||||||| || ||||||||| Sbjct 2999249 CAAATTTTCGTGAAGACACTCACTGGCAAGACTATCACGCTCGAGGTTGAGAGCTCAGAC 2999308 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||||||||| || || || ||||| |||||||| Sbjct 2999309 ACCATTGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAGCAG 2999368 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||||| || || ||| | |||||| | ||||||||| || Sbjct 2999369 CGTCTTATCTTCGCCGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGATTATAACATC 2999428 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || || || || ||| Sbjct 2999429 CAGAAGGAGTCCACTCTCCACCTGGTGTTG 2999458 Score = 120 bits (132), Expect = 7e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || |||||||| ||||| || | || || |||| Sbjct 2999028 TCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTCGAGTCCAGCGATACTATCG 2999087 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | ||||| || ||||| |||||||| || || || ||||| |||||||| || || | Sbjct 2999088 ACAACGTTAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGTCTCA 2999147 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||||||||| ||||| || ||||| | || || | ||||| || |||| || | Sbjct 2999148 TCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTCTCTGATTACAATATCCAGAAGG 2999207 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || || || || Sbjct 2999208 AGTCCACTCTCCACCTCGT 2999226 Score = 116 bits (128), Expect = 9e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||| ||||| || | || |||||||| ||||| || Sbjct 2998751 TCACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGATACCATCGACAACGTTAAGT 2998810 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || || ||||| |||||||| || || ||||||||||||| Sbjct 2998811 CGAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAGCAGCGTCTCATCTTCGCCGGAA 2998870 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || ||||| | || || | ||||| || |||| || || || || || | Sbjct 2998871 AGCAGCTTGAGGATGGCCGCACCCTCTCTGATTACAATATCCAGAAGGAGTCCACTCTCC 2998930 Query 178123 ATCTTGT 178129 | || || Sbjct 2998931 ACCTCGT 2998937 >seq8 Length=1853719 Score = 120 bits (132), Expect = 7e-22 Identities = 137/183 (75%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 998882 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 998938 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || || |||||||| || Sbjct 998939 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCG 998998 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||||||||| |||||||| ||||| | || || ||| || ||| |||| Sbjct 998999 TCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTGAGCGACTACAACATCCA 999058 Query 178106 AAA 178108 || Sbjct 999059 GAA 999061 >seq3 Length=4213559 Score = 95.1 bits (104), Expect = 3e-14 Identities = 180/264 (68%), Gaps = 6/264 (2%) Strand=Plus/Plus Query 214128 GTTTTTCTGGTTGCTTTT---GCGGCAAATGGCATCTTTGTATGCGATGAAAGGCATTCC 214184 ||| |||||||| || || | |||| ||||| ||||| ||||| || | || Sbjct 881782 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 881838 Query 214185 CACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTT 214244 |||| || || |||||||| | |||||| | || ||||| | | ||| Sbjct 881839 AGTCTCGGTCTGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCG 881898 Query 214245 GGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATC 214304 | | | ||||| | |||||||| | || |||| || ||||| |||||||||||| Sbjct 881899 GCCACGGCCCTCCTGCTCGTACTTCACGTAGAGAGCATCGAATTCATCACCGTAGACATC 881958 Query 214305 ATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCT 214364 | | |||||||| ||||||||||||||||| || |||| | || || || || | Sbjct 881959 AGCCAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACG 882018 Query 214365 TTTCATGAAAAGGTCGGAAGTCCA 214388 ||||| || || |||| ||||| Sbjct 882019 CTTCATAAAGAGATCGGGGGTCCA 882042 >seq2 Length=4573486 Score = 84.2 bits (92), Expect = 5e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || || || || ||||| || || || ||||||||||| || |||||||| Sbjct 2591803 GACAAGGAGGGTATTCCCCCTGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 2591744 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | |||||| | ||||| ||| |||| || || || || || || || || Sbjct 2591743 GATGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 2591688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729796524654