Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq8 138 1e-27 seq4 131 2e-25 seq2 109 5e-19 >seq8 Length=1853719 Score = 138 bits (152), Expect = 1e-27 Identities = 142/183 (78%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || ||||||||||| |||||||| | Sbjct 999063 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGA 999004 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||| ||||| ||||| | ||||| || |||||||||| ||| || ||| ||| | Sbjct 999003 TCAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 998945 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 998944 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 998885 Query 41852 AAA 41854 ||| Sbjct 998884 AAA 998882 >seq4 Length=3327763 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | ||| || || || ||| ||||||||| || || || || || Sbjct 2999245 GCCACCACGGAGGCGAAGCACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGA 2999186 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || |||||||| |||||||| || || ||||| ||||| | || Sbjct 2999185 GAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGG 2999126 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| ||| || ||| |||| | | | ||| ||||| ||||| | Sbjct 2999125 AATGCCCTCCTTGTCCTGGATCTTCGACTT-AACGTTGTCGATAGTATCGCTGGACTCGA 2999067 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 |||| | || || || || || ||||| ||||| |||| Sbjct 2999066 CCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 2999028 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | ||| || || || ||| ||||||||| || || || || || Sbjct 2998956 GCCACCACGGAGGCGAAGCACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCAGA 2998897 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || |||||||| |||||||| || || ||||| ||||| | || Sbjct 2998896 GAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGG 2998837 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| ||| || ||| |||| | | | || ||||| ||||| | Sbjct 2998836 AATGCCCTCCTTGTCCTGGATCTTCGACTT-AACGTTGTCGATGGTATCGCTGGACTCGA 2998778 Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838 |||| | || || || || || || Sbjct 2998777 CCTCAAGGGTGATGGTCTTGCCAGT 2998753 >seq2 Length=4573486 Score = 109 bits (120), Expect = 5e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | || || || || || ||||||||| ||||| || || Sbjct 2591666 ACCACCACCACGCAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 2591725 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| | || |||||||||||||||||||| ||||||||||||||||| | Sbjct 2591726 CGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCAGG 2591785 Query 41752 GGGAACGCTCTCCTTGTC 41769 ||||| | ||||||||| Sbjct 2591786 GGGAATACCCTCCTTGTC 2591803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303474129200