Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F002072235.1_202017-03-24] 598 sequences; 33,213,390 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq71 127 3e-24 seq17 125 9e-24 >seq71 Length=112036 Score = 127 bits (140), Expect = 3e-24 Identities = 678/1071 (63%), Gaps = 24/1071 (2%) Strand=Plus/Minus Query 63024 ATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 63083 ||||| || | || | || |||||||| ||||| || |||||||| || || ||||| Sbjct 38903 ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAG 38844 Query 63084 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTAT 63142 || ||||||| ||| |||| | || | ||| || | ||||| | || ||||||| || Sbjct 38843 GGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAGA-GCTTCTGAGCCTTGAT 38785 Query 63143 TATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGAGTATACAATCGTTCGAACTCGT 63198 | || | | ||| | ||||| | | ||| | | |||||||| | Sbjct 38784 GGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCA--TCGAACTCAT 38729 Query 63199 CTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63258 | || | |||| ||| | || || | || || | | | ||| || |||| Sbjct 38728 CACCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGT 38669 Query 63259 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTG 63318 ||| || || ||||| |||||||| || |||| | ||| || || || | | Sbjct 38668 TGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAG 38609 Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378 | | |||||| || || ||||| |||||||||||| | | | ||| | | Sbjct 38608 CGCGAACTTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGT 38549 Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438 ||||||| |||| ||| ||||| | | ||||| || ||||| || ||||| || | | Sbjct 38548 GCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCTTGTTACCACCCTGGTCGACAT 38489 Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498 | | || ||||| ||| | || | || ||| |||| ||||||||| || || |||| Sbjct 38488 AGCGTGCAGTGTTGTTAAACACGCGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGG 38429 Query 63499 TACCGGAGATATAGCCTCCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCC 63556 | || || || || | || |||||| | ||| ||||| || || || Sbjct 38428 TTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTGGACATT--CAGACCGATACCACC 38371 Query 63557 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATC 63616 || | || ||||| | || || || | || || || || || || ||||| || Sbjct 38370 AGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAAATACCCTCAATGCTGTC 38311 Query 63617 ATCGATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGAGTAGTTCCCGCATT 63673 | || | | | || || | ||| |||| | ||| | | | ||| | ||||| Sbjct 38310 AGCGCTGACATCAACCAGGA---AGCAAGACGCAAGCTGGGGCTGGGGAGTAGCGGCATT 38254 Query 63674 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 63733 || | || || || ||||| || || | || | || | | | ||| |||||||| Sbjct 38253 GAACAGAGTGGGGGAGGCGTGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAAT 38194 Query 63734 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 63793 ||| || |||||| || ||||| || || |||||||| | || ||||||||| Sbjct 38193 AGCCTTCTCAATATCCTCGCCGTGGATTCCGACAGCAACACGCATCAGCAAGTGCTGAGG 38134 Query 63794 TCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 63853 | ||| ||| ||| ||| || | | ||| || || | || || || || Sbjct 38133 ACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCC 38074 Query 63854 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATA 63913 || ||||||| ||||| || ||||| | |||| |||| ||||||| || || Sbjct 38073 GAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCGAGTTGAGCTCCTCAGCATG 38014 Query 63914 TTTGTTAACTATATC--CATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTA 63971 || |||| || || ||| | | |||| || || |||| | | || || || Sbjct 38013 CTTCATAACGATCTCGTAATGTTCCT--TTGAGATCATAGGAGCAGGCTTATTGTTCTTG 37956 Query 63972 GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTG 64031 || || || |||| | | | ||| || || ||| | ||||| |||| |||| Sbjct 37955 GGGTTCACGTAGTGGTACAGATCGGAGATGACCATGGAGAATTGCTTTTTAGTTTGCTTG 37896 Query 64032 TGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64082 || || || || | ||| || | ||| || ||||| || || || || ||| Sbjct 37895 TGGAGGTTCGAAACGGCGATACGGGCAGCCAGAATAGCGTAGTCGGGGTGT 37845 >seq17 Length=514120 Score = 125 bits (138), Expect = 9e-24 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || ||| |||||||| ||| ||||||||||| | | || | ||||| || Sbjct 138607 AACAGCAGACAGGCGAAATCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 138548 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| |||||||| ||||||||||| || ||||| || ||||| |||||||| || Sbjct 138547 AAAGTGAGACCGGGCATAAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCA 138488 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 || |||||||| || || || || || ||||||| Sbjct 138487 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 138454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629812892113440