Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sp._20HKF2_20[genbank_20GCA_5F002000375.1_202017-02- 15] 94 sequences; 31,484,772 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq84 116 3e-21 seq92 96.9 3e-15 >seq84 Length=1111822 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||| |||||| |||||||||||||| ||||||||||| || || |||| Sbjct 170360 AACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCC 170301 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 ||||| || || || ||||| || | ||||| ||||| || || | ||||||||||||| Sbjct 170300 TCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCC 170241 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || |||||| | | |||| | ||| ||||| | || || ||| Sbjct 170240 TGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACCTCTAGCGTGATAGTC 170181 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || ||||||||||| |||||||| ||||| Sbjct 170180 TTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 170149 Score = 113 bits (124), Expect = 4e-20 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| |||||||||||| ||| ||| |||| ||| Sbjct 169618 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 169559 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || |||||||| ||||| ||||||||||| ||||| | ||||||||||||| Sbjct 169558 AGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCC 169502 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||| ||||| |||||||||||| ||| ||| |||| ||| Sbjct 169901 ACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 169842 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || |||||||| || | ||||| |||||||| || | |||||||||||| | Sbjct 169841 AACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 169782 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | | |||| ||| ||||| | || || ||||| Sbjct 169781 ATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTCTTT 169722 Query 45308 CCCGTCAGAGTCTTCAC 45324 || ||||| ||||| || Sbjct 169721 CCGGTCAGGGTCTTGAC 169705 >seq92 Length=2471328 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| |||| ||| | || || || || || |||||||| | Sbjct 512459 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 512400 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 ||| ||||||||||| || || | |||||||||||| || || ||| || Sbjct 512399 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 512340 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | |||| | ||| || || | |||||| ||||| |||||||| ||||| || | Sbjct 512339 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 512280 Query 45327 A 45327 | Sbjct 512279 A 512279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074747391974