Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sp._20HKF2_20[genbank_20GCA_5F002000375.1_202017-02- 15] 94 sequences; 31,484,772 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq94 165 1e-35 seq93 129 7e-25 >seq94 Length=6510798 Score = 165 bits (182), Expect = 1e-35 Identities = 732/1144 (64%), Gaps = 20/1144 (2%) Strand=Plus/Minus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 || ||||| || ||||| || ||||||| || | || | || ||||||||||| Sbjct 5080266 GAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAC 5080207 Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017 || ||| | ||||| || | || | || |||||||| |||| || |||||| Sbjct 5080206 AGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCC 5080147 Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077 || || || ||||| || ||||||| || |||| | || | ||| || | ||||| | Sbjct 5080146 TTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGA-G 5080088 Query 63078 ACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGTGTATACA 63132 || ||||||| || | || | | ||||| ||||| | | ||| | Sbjct 5080087 TTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCTTGCTCGTACTTGGCGTA---A 5080033 Query 63133 ATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 63191 | | |||||||| || || | |||| ||| || ||| || | || || | Sbjct 5080032 AGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCAGAAG 5079973 Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63250 | | ||| || |||| ||| || || ||||||||||| || || |||| ||||| Sbjct 5079972 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAGAGCG 5079913 Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 || ||| || || | || | | ||||| || || ||||| ||||||||||| Sbjct 5079912 TAGAAA-AGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAA 5079854 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | | ||| | |||||||| |||| ||| || || | | ||||| || ||||| Sbjct 5079853 TTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTT 5079794 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 || ||||| || | || | |||||||| ||| | || | || ||| |||| |||||| Sbjct 5079793 ACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 5079734 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATT 63488 ||| || || ||||| || || || || | || ||||| | ||| Sbjct 5079733 GTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 5079674 Query 63489 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAG 63548 ||||| || || || || | || ||||| | || || || | || |||||| Sbjct 5079673 --CAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCATAG 5079616 Query 63549 ATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63608 |||||||| ||||| ||| || |||||| || || || || | | ||| | | Sbjct 5079615 ATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGG 5079556 Query 63609 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63668 ||| | ||||| || | || || |||||||| || || | || | || | | Sbjct 5079555 GGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATCAAG 5079496 Query 63669 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63728 | ||| |||||||| || || || ||| || || || || || |||||||| Sbjct 5079495 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAACACGCATC 5079436 Query 63729 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63788 | || |||||| || | ||| | | || ||| || | | ||| || || Sbjct 5079435 AGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAATCCGAAGGAGGTATGAACGCTCG 5079376 Query 63789 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63848 | || || || || || ||||||| ||||| || ||||| | ||| |||||||| Sbjct 5079375 AGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATTGCCGAGTTG 5079316 Query 63849 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGGAGAATG 63907 || | || || || |||| || | ||| ||| | | |||| || || |||| | | Sbjct 5079315 AGCTCCTCGGCATGCTTCATAACAATCT-CATAGTGCTCCTTTGAGATCATAGGAGCAGG 5079257 Query 63908 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 63967 || || || || || ||||| | | | | ||| || || | ||| | || Sbjct 5079256 CTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGAGATGACCATAGAGAATTGCTT 5079197 Query 63968 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGG 64027 |||||||| |||||| || || || ||||| || | || || |||||||| || || || Sbjct 5079196 TTTTGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCAGG 5079137 Query 64028 ATGT 64031 ||| Sbjct 5079136 GTGT 5079133 >seq93 Length=8338004 Score = 129 bits (142), Expect = 7e-25 Identities = 121/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || ||| ||||| || ||| || |||||||| | | || || |||||||| Sbjct 6591988 AACAGCAGACAAGCGAAGTCAGTGTGGAGCCCCTCGTCACGAGAGATCAGCTCGTTGGAG 6591929 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| || ||||| ||||||||||| || ||||| || |||||||||||||| ||| Sbjct 6591928 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCA 6591869 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 || |||||||| || || || || || ||||||| Sbjct 6591868 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 6591835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946468037040