Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sp._20HKF2_20[genbank_20GCA_5F002000375.1_202017-02- 15] 94 sequences; 31,484,772 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq93 138 2e-27 seq90 107 4e-18 seq89 91.5 3e-13 seq94 84.2 4e-11 >seq93 Length=8338004 Score = 138 bits (152), Expect = 2e-27 Identities = 277/405 (68%), Gaps = 12/405 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||||||||| |||||||||||||||||| || | Sbjct 6592246 TCGAAGAAGTTGGTCTTGCCGGCCAGAGAGATGGACTCCATGAAGTCGAAGGGATTGGCA 6592187 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| | ||| | ||| || || || | | |||||| || || ||||| | Sbjct 6592186 GAGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATG 6592127 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | ||||||||||||| || | || |||| || ||| | | Sbjct 6592126 TACTGGCACATCAGCTTGGAGTTCATGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAG 6592067 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCA----CCTGTGCCAGAGA 251798 || |||| ||| || |||| ||||| | | ||| ||| | | || | | | Sbjct 6592066 AACTCCTGCTCGATGCCAACGGCCTCGACAATGATTTCCTCAACAACCTTGGGATCGGGG 6592007 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCG 251856 | | | ||| || | ||| |||| || | || || | || ||| || |||||| Sbjct 6592006 C-GGTGGTT---CATGTGAGAGAACAGCAGACAAGCGAAGTCAGT--GTGGAGCCCCTCG 6591953 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||| | ||||||||| | | || |||||||||| ||||| ||| | ||| Sbjct 6591952 TCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGC 6591893 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||||||| | || || |||||||| | | |||||||||| Sbjct 6591892 CAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 6591848 >seq90 Length=2005007 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 279369 TTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGT 279428 ||||| || || || |||| ||||||||||| ||| || | ||| | |||||||| Sbjct 1528051 TTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAACCAGACTCACCTGCGCCTCAAGCGT 1528110 Query 279429 GGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCC 279488 || | || || |||||| |||||||||| || | || |||| ||| || ||||| ||| Sbjct 1528111 GGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTTCCGGAAAGACCACCCTCATGCGTGCC 1528170 Query 279489 ATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCATCTGAGGTAAGGACAGTGTATGTA 279548 ||| |||| ||||| || || || || || |||||| | ||| || || || Sbjct 1528171 ATTAACAACGAGCAGCTTGAGGGCTTCCCCAAGAAGGATGAGGTCAAGACCGTCTACGTC 1528230 Query 279549 GAGCACGACATCGACTC 279565 |||||||| ||||||| Sbjct 1528231 GAGCACGATCTCGACTC 1528247 >seq89 Length=1988107 Score = 91.5 bits (100), Expect = 3e-13 Identities = 356/558 (64%), Gaps = 14/558 (3%) Strand=Plus/Minus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATG----ATGTGGAGCGTTCTAT 218573 ||||||||| ||||||||||||| || ||| ||||| || ||||||| || Sbjct 1822879 GACTTCATCAACAAGGAGCTCATCCTGTTCA----GTATGGCGGATAACCAGCGTTCGAT 1822824 Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633 || ||| |||||||| | |||||| ||||| ||| | || || ||| Sbjct 1822823 CCCTTCCGTTGTGGATGGTTTGAAGCCAGGACAGCGCAAGGTGCTTCACACCTGTTTCCG 1822764 Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693 || ||||| | || || ||||| | | || | | ||| ||||||||| ||| | Sbjct 1822763 CCGCAACCTAAAGAAGGACATGAAGGTGGTTGAGCTGGCAGGTCATGTATCCGGAATGAC 1822704 Query 218694 TGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTA 218753 | ||||||||||||||| |||||| | || || || | || ||| || Sbjct 1822703 AGCCTACCATCACGGTGATGTCTCCCTGCAGCAGACTATCGTTGGTCTTGCTCAGACCTT 1822644 Query 218754 TGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATT 218813 ||| ||| |||||||| |||| ||| |||| || | || ||| ||| || Sbjct 1822643 TGTTGGCTCCAACAACATCAACTGCCTGGAGCCCAGTGGAAATTTCGGTAGTCGACTCCA 1822584 Query 218814 GGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCG 218873 ||||| ||| |||| ||| | || || | || |||| ||| | | || Sbjct 1822583 AGGTGGTGGCGATTGTGCCAGTGCTCGTTACATTTACACTCGCCTGTCTCCCTTTGCACG 1822524 Query 218874 CCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTC 218933 | |||| ||| | ||||||||| || || | ||| || |||||||| Sbjct 1822523 CAAGGTTTTCCACTCGGCCGATGAACCCCTACTGACGTACAACGAAGACGATGGCAAGAA 1822464 Query 218934 GATTGAGCCCGAGTGGTATGTGCCTGCTATTCC---GTTTTTGCTCGTAAATGGTGCCAA 218990 ||||||||||||| | | |||||| | || | ||||| || || ||||| | Sbjct 1822463 GATTGAGCCCGAGGTCTTTATGCCTGTCGTCCCGATGATTTTGATC---AACGGTGCGGA 1822407 Query 218991 TGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGA 219050 ||||||||| || || | ||| || || || |||||||| |||| || | | Sbjct 1822406 TGGTATCGGAACTGGTTGGAGTTCTTCTATCCCCAACTACAATCCTGAGGATGTCGTGAA 1822347 Query 219051 CAACGTCAAGCGTCTCAT 219068 ||| ||||||| || || Sbjct 1822346 CAATCTCAAGCGCCTGAT 1822329 >seq94 Length=6510798 Score = 84.2 bits (92), Expect = 4e-11 Identities = 266/410 (65%), Gaps = 3/410 (1%) Strand=Plus/Minus Query 294094 CCCTCAGACTCATACTTGGTGTAAAGCTCTTCGTATTCCTTGCCATATACATCAGACAGG 294153 ||||| ||| ||||||| |||||| | ||| | |||| ||| || ||||||| |||| Sbjct 5080056 CCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGG 5079997 Query 294154 CCAGGGCACTCGTGAGGGTCAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCTTCATG 294213 || || ||||| ||| | || | ||| | | | | ||| ||||||||||| Sbjct 5079996 CCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATA 5079937 Query 294214 AATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCACCT 294273 || || || | ||||| ||||| || | || ||||| || | ||||| ||| Sbjct 5079936 AAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCG 5079877 Query 294274 TGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATACACA 294333 || || || || ||||| || | || |||| || || ||||| || | | Sbjct 5079876 TGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATA 5079817 Query 294334 GCAAAGG-ACC--CCTTCCTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTGTCAAAC 294390 ||||||| ||| | || || ||||||| | | ||| | ||| ||| |||| Sbjct 5079816 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAAC 5079757 Query 294391 ACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATCTCAGCCCCG 294450 || ||||||||| || || || | ||| || |||||||| | ||| | || ||| Sbjct 5079756 ACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCG 5079697 Query 294451 CGCCCGCGAATGTCGCTCATGTGGAGACCAATGCCACCGCCATACTTGGA 294500 |||||||| | | | ||||| || |||||| | |||||| Sbjct 5079696 GTAGCGCGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGA 5079647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835562099054