Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sp._20HKF2_20[genbank_20GCA_5F002000375.1_202017-02- 15] 94 sequences; 31,484,772 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq93 104 5e-17 >seq93 Length=8338004 Score = 104 bits (114), Expect = 5e-17 Identities = 267/404 (66%), Gaps = 6/404 (1%) Strand=Plus/Plus Query 243353 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 243412 ||||||| |||||| ||| || |||||||||| ||| | | || |||||| | | Sbjct 6591883 CCATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGA 6591942 Query 243413 TCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGA 243472 || ||| |||||||| || ||| | |||| | || ||| || | | || Sbjct 6591943 TCTCTCGTGACGAGGGGCTCCACACTGACTTCGCTTGTCTGCTGTTCTCTCACAT---GA 6591999 Query 243473 ACAAGCTACCAT-TCGAAACG--GTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAA 243529 || | | || || || | || | ||||||| || || |||| | ||| Sbjct 6592000 ACCACCGCCCCGATCCCAAGGTTGTTGAGGAAATCATTGTCGAGGCCGTTGGCATCGAGC 6592059 Query 243530 AGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589 |||| ||| | |||||| |||| ||| || ||||||||||||| | || ||| Sbjct 6592060 AGGAGTTCTTGACTGACGCTCTTCCCTGCGCTCTGCTTGGCATGAACTCCAAGCTGATGT 6592119 Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649 | |||||||| || ||||| || |||||| | | | || || || | |||| | Sbjct 6592120 GCCAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACT 6592179 Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709 ||||||| || ||||| | ||| |||||| ||| || || || || || |||| Sbjct 6592180 ACAACTCTGCCAATCCCTTCGACTTCATGGAGTCCATCTCTCTGGCCGGCAAGACCAACT 6592239 Query 243710 TCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 ||||||| ||||||||| |||| || || ||||||| ||| Sbjct 6592240 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGTCATG 6592283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878671718900