Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sp._20HKF2_20[genbank_20GCA_5F002000375.1_202017-02-
15] 94 sequences; 31,484,772 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq84 131 1e-25
>seq84
Length=1111822
Score = 131 bits (144), Expect = 1e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | ||||||||||||| || || ||||||||||| || ||||| || || ||
Sbjct 170376 GCCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 170317
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || |||| || || || ||||| || || || | |||||| ||||| || ||
Sbjct 170316 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGG 170257
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | |||||| | || |||||| |||||| |
Sbjct 170256 AATACCCTCCTTGTCCTGGATC-TTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGA 170198
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || || || || ||||| | || || ||||| ||||||||
Sbjct 170197 CCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 170149
Score = 93.3 bits (102), Expect = 3e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | || || | ||||| |||||||| |||||| || ||||| || || ||
Sbjct 169637 GCCGCCACGGAGGCGAAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 169578
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || |||| || || || || ||||| || || |||||||||||||| || ||
Sbjct 169577 CAGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGG 169518
Query 34599 CACTCCCTCCTTGTCTGTGATCTT 34622
| ||||||||||| ||||||
Sbjct 169517 GATACCCTCCTTGTCCTGGATCTT 169494
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | || | ||||| ||| ||||| || ||||| || || ||
Sbjct 170147 CCACCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 170088
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| || | |||||||| || || || || || || | ||||||||| || || ||
Sbjct 170087 AGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGA 170028
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| |||||||| ||| |||||| | || || || || ||||| ||| ||
Sbjct 170027 ATGCCCTCCTTATCTTGGATCTTG-GACTTCACATTATCGATAGTGTCGGATGACTCGAC 169969
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || ||||| || || | ||| || || |||||||||||
Sbjct 169968 CTCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 169921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729239437902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |