Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sp._20HKF2_20[genbank_20GCA_5F002000375.1_202017-02- 15] 94 sequences; 31,484,772 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq84 89.7 4e-13 >seq84 Length=1111822 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || ||||| || || || ||| || | || ||||| ||| | Sbjct 170149 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 170208 Query 27850 GACGATGT--ACAATCGGTCAAA-CAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 ||| | | |||| || | | | ||| | || ||||| || ||| |||| || Sbjct 170209 GACACTATCGACAA-CGTTAAGAGCAAGATCCAG--GACAAGGAGGGTATTCCCCCTGAC 170265 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 ||||| || | || || || || || || |||| |||| ||| | | || || ||| Sbjct 170266 CAGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTAC 170325 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||||||| || |||||||| |||| |||| |||||| ||||||||||| Sbjct 170326 AACATCCAGAAGGAGAGCACCCTGCACCTGGTGTTGCGTCTGCGTGGCGGC 170376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355861992315138