Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sp._20HKF2_20[genbank_20GCA_5F002000375.1_202017-02- 15] 94 sequences; 31,484,772 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq84 145 2e-29 seq92 114 3e-20 seq94 104 6e-17 >seq84 Length=1111822 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| || ||||| || ||||| || ||||| || ||||||||| Sbjct 170152 CAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCAGAC 170211 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| || || || || || |||||||| Sbjct 170212 ACTATCGACAACGTTAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAGCAG 170271 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || ||| | |||||| | || || ||| || Sbjct 170272 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAACATC 170331 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || ||||| || || ||| Sbjct 170332 CAGAAGGAGAGCACCCTGCACCTGGTGTTG 170361 Score = 134 bits (148), Expect = 3e-26 Identities = 151/201 (75%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || ||||| |||||||| || || |||||||||| Sbjct 169703 TCGTCAAGACCCTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCG 169762 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | ||||| || |||||||||||||| || || || || || |||||||| || |||| Sbjct 169763 ACAACGTTAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTTA 169822 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | |||||||| || ||| | || || || | ||||| |||| || ||| |||| |||| Sbjct 169823 TTTTCGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAAG 169882 Query 178111 AATCAACACTGCATCTTGTTT 178131 | || || || || |||| || Sbjct 169883 AGTCCACTCTACA-CTTGGTT 169902 Score = 116 bits (128), Expect = 9e-21 Identities = 140/189 (74%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||| ||||| || | || |||||||| |||||||| Sbjct 169432 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAACGTCAAGT 169491 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || |||||||| ||||| || || | ||||||||||| | Sbjct 169492 CGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGCA 169551 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || || || | ||||| |||| || ||| |||| || || || || || | Sbjct 169552 AGCAGCTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCC 169611 Query 178123 ATCTTGTTT 178131 | |||| || Sbjct 169612 A-CTTGGTT 169619 >seq92 Length=2471328 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 512278 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 512334 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || ||||| || || Sbjct 512335 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCG 512394 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || |||||||| ||||| | || || ||| || ||| |||| Sbjct 512395 CCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 512454 Query 178106 AAA 178108 || Sbjct 512455 GAA 512457 >seq94 Length=6510798 Score = 104 bits (114), Expect = 6e-17 Identities = 188/275 (68%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 214128 GTTTTTCTGGTTGCTTTTGCGGCAAATGGCATCTTTGTATGCGATGAAAGGCATTCCCAC 214187 ||| |||||||| || || | | |||||| ||||| ||||| || | || Sbjct 5080180 GTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGT 5080121 Query 214188 CTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTTGGC 214247 |||| || || | |||||| || |||||||| || ||||| | | ||| | | Sbjct 5080120 CTCGGTCTGGGCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGATGGTCTTGCGGCC 5080061 Query 214248 TCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATC 214307 | ||||| | |||||||| | ||||| | || || ||| |||||||||||| | Sbjct 5080060 ACGGCCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGC 5080001 Query 214308 AAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTT 214367 || ||||||||||||||||||||||| || |||| | || || || || | || Sbjct 5080000 CAGGCCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTT 5079941 Query 214368 CATGAAAAGGTCGGAAGTCCAGATTGCATAAAAAA 214402 ||| || ||||||| ||||| | || || |||| Sbjct 5079940 CATAAAGAGGTCGGGGGTCCACAGAGCGTAGAAAA 5079906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729750256236