Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq4 125 2e-23 seq11 114 3e-20 >seq4 Length=1993899 Score = 125 bits (138), Expect = 2e-23 Identities = 163/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 230416 GAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGG 230474 |||||| | ||||||| |||| || ||| || | ||||||||||| | || ||| | Sbjct 1571392 GAGTTCCTGACTGACGCTCTTCCTTG-CGCTCTGCTCGGCATGAACGCCAAGCTGATGTG 1571450 Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534 |||||||| || ||||| || ||||| | | || || || || || |||| || Sbjct 1571451 CCAGTACATTGAGTTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGAAACCAGAAGTACTA 1571510 Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594 ||||||| |||||||| | || |||||| ||| || || || ||||||||||| Sbjct 1571511 CAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCCGGCAAGACCAACTT 1571570 Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||| ||||||||| ||||||| |||| | ||||| ||| Sbjct 1571571 CTTCGAGAAGCGTGTCGGTGACTACCAGAAAGCCGGTGTCATG 1571613 >seq11 Length=1134361 Score = 114 bits (126), Expect = 3e-20 Identities = 187/269 (70%), Gaps = 3/269 (1%) Strand=Plus/Minus Query 319401 CTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATG 319460 ||| ||||| |||| || || || ||| || |||||| || | ||||| || Sbjct 1077888 CTTGACGAAATCGGCAAGGTTACCGGGGTAGTTAACCAGCTTC---TTCTGCTCGTAGTG 1077832 Query 319461 GATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 319520 | ||| |||||| || |||||||||| || |||||||| || || |||| | | Sbjct 1077831 GTAAATGTCGGTGCAGACCTCGTCGAGGAAGCCAGAGTCGTGAGAGACGATCAAACTGGT 1077772 Query 319521 AACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATG 319580 | ||| | | || | |||||||| || |||| | ||||| | ||| | ||| Sbjct 1077771 GATGTCGGTGTGCTTCTTGAGGTATTCCTGCAGCCACTTGACGTTCGCAACATCCAAATG 1077712 Query 319581 GTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 319640 ||| || || |||||||||||||| | | || ||||| ||||| ||||| || ||||| Sbjct 1077711 GTTAGTAGGTTCGTCAAGAAGCAGAACATCAGCCTTCAGAAGCATGGCACGGGCCAGAGC 1077652 Query 319641 GAGTTTCATTTTCCACCCTCCGGAAAGAG 319669 || ||||| ||||| || || || |||| Sbjct 1077651 AAGCTTCATCTTCCAACCACCAGACAGAG 1077623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822861516920