Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq12 194 2e-44 seq4 120 4e-22 >seq12 Length=1129212 Score = 194 bits (214), Expect = 2e-44 Identities = 546/836 (65%), Gaps = 2/836 (0%) Strand=Plus/Plus Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63306 ||| ||||||| ||| || || ||||| || ||||| || |||| ||||| ||| | Sbjct 723440 CCAGTCTCCGTTGGCCTCGACACGCTTCATGAACAGATCGGGGGTCCACAGAGC-ATAGA 723498 Query 63307 ATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63366 | ||||| | | | |||||| || || ||||| |||||||||||| | | Sbjct 723499 ACAGATCACGGGCACGGATTTCCTCCTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGA 723558 Query 63367 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63426 || ||| | ||||| || || | ||| || || | | ||||| || |||||||| | Sbjct 723559 AAACATCCGCGTGCCATGGCTCAAGGTAGATTGCAAAGGCACCAGGGCGCTTGTTTCCAC 723618 Query 63427 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTG 63486 |||| || | || | || ||||| || || || | | ||| || | |||||||| | Sbjct 723619 CCTGGTCGACATAGCGGGCAGTGTTGTTGTACACACGGAGCATGGGGACGATACCGTTAG 723678 Query 63487 ATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGAC 63546 | |||| || || ||| || || ||| | |||||||| || |||| Sbjct 723679 AGGTACCGTTAGTTCCGCCAATGTAAGAGCCAGTCGCACGAATGCGGTGGATGTTCAGAC 723738 Query 63547 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTT 63606 | || || || || | || ||||| | || || || || ||||||||||| || | Sbjct 723739 CGATACCACCAGCAGTCTTGGAGATCATGGCACAGGTCTTCAAGGTGTCATAGATACCCT 723798 Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666 | ||||| || || |||||| || || || || || || ||| | | | || | Sbjct 723799 CAATGCTGTCCTCCTTCATGTCAACCAGGAAGCAAGAAGCCAGCTGGGGCTGCGGGGTAC 723858 Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726 | || || || | ||||||||||||||| || || | |||| ||| | | | ||| | Sbjct 723859 CAGCGTTGAACAGGGTAGGAGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGG 723918 Query 63727 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63786 ||||||| || || |||||| | |||||| || || || |||||||| |||| || Sbjct 723919 TCTCAATGGCCTTCTCAATATCCTCTCCATGAATACCAACAGCAACACGCATCAACAGGT 723978 Query 63787 GCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63846 ||||||| | ||| ||| || | || | || || || |||| ||| | Sbjct 723979 GCTGAGGACGCTCAGCAACCTTTCCATCGATACGGAGCAGATATGAACGCTCCAGAGTCT 724038 Query 63847 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTAT 63906 | || || || ||||||| ||||| || ||||| | ||| | || || |||| || Sbjct 724039 TGAAGCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCAGAGTTAAGCTCAT 724098 Query 63907 CCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCAT 63966 | || || |||| || || | || | | || || || |||| | || | || Sbjct 724099 CTGCATGCTTTGTAACAATCTCATAGATATTTTTGGAGATCATAGGAGCGGGCTTGCTAT 724158 Query 63967 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 64026 | || || || ||||||| | | | ||| || || | |||| | || || || | Sbjct 724159 TCTTGGGGTTGACATAGTGGTAGAGATCGGAGATGACCATAGAAAATTGCTTCTTGGTCT 724218 Query 64027 CCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64082 |||||| || || || | ||| || | || || ||||| ||||| || || ||| Sbjct 724219 GCTTGTGAAGGTTGGAGACGGCAATACGAGCTGCCAGAATAGCATAGTCGGGGTGT 724274 >seq4 Length=1993899 Score = 120 bits (132), Expect = 4e-22 Identities = 286/429 (67%), Gaps = 5/429 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| || |||||||||||| || | || | ||||| || || || || Sbjct 1571309 CAGGCGAAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAGA 1571250 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || |||||||| || ||||| || || || ||||| || || || |||||| Sbjct 1571249 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAG 1571190 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33758 || || || || ||||| ||||||| || | || | || | | ||| | Sbjct 1571189 ATACCCTCGACGGCAGCGAAGGCAACCAGACGGGAAGCAAAGGTGGAGTCACGGTCGTTG 1571130 Query 33759 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||| | || ||||| |||||||| || | ||||| || || || ||||||| Sbjct 1571129 ATCCAGCGGATG-GCCCAGTCGGCCTTACGCTTGATGCAAGGAATAGTCTCAATGGCATC 1571071 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 ||||| ||| | | || || || | || |||||||| | |||| || | Sbjct 1571070 GAAGAGGTAGGTGCGCTGCTTGGGCTCCTTGATGTAGGTATCGATGAGAAGAGAGTAGGT 1571011 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 || || || ||||| || || ||||| || |||||||| || | |||||| || | Sbjct 1571010 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCAGTGAC 1570951 Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997 ||| || || | || || || || | | || ||||| || || || ||| ||| || Sbjct 1570950 CTGGACCTCAGCACTGAAACGCTCAACAAGGTTCTCATTAACAATGCCGTCAGAGGCAGC 1570891 Query 33998 AAAAAACGC 34006 || || || Sbjct 1570890 GAAGAAAGC 1570882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816938691520