Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 1e-13 seq4 82.4 8e-11 >seq9 Length=1158989 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 || || || || | ||| | || | ||||| || ||||| || || ||||| ||||| Sbjct 442029 TGACCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCA 441970 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | || | ||||| ||||| ||||||||| |||| ||||| || || |||||| Sbjct 441969 GAAAGGGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGA 441910 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTC 139713 || || || || ||||| ||| | || | || | | || | || |||| | ||| Sbjct 441909 GGGATACCCTCCTTGTCC-TGAATCTTGCTCTTCACGTTGTCGATGGTATCGGAAGACTC 441851 Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| || | || | |||||||||||||| || || ||||| || |||||| Sbjct 441850 CACTTCCAGTGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCATA 441799 >seq4 Length=1993899 Score = 82.4 bits (90), Expect = 8e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| || | |||||| ||||||| | || |||||| | || | || | ||| Sbjct 1571371 GAGGCTGTTGGCATTGAGCAAGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTGCTCGGC 1571430 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||||| | |||||||| ||||||| ||||| || || ||| | || || | Sbjct 1571431 ATGAACGCCAAGCTGATGTGCCAGTACATTGAGTTCGTCGCTGACCGTCTCCTGGTCGCT 1571490 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | | ||| ||||| || | |||||||| || ||| | ||| || Sbjct 1571491 CTCGGAAACCAGAAGTACTACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCC 1571550 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | ||||| || ||||| ||||||| ||||| || || ||| Sbjct 1571551 CTGGCCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 1571595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063479132800