Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq12 176 6e-39 seq4 138 2e-27 >seq12 Length=1129212 Score = 176 bits (194), Expect = 6e-39 Identities = 533/818 (65%), Gaps = 4/818 (0%) Strand=Plus/Plus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 72080 || || ||||| || ||||| || |||| ||||| ||| || ||||| | || | Sbjct 723459 ACACGCTTCATGAACAGATCGGGGGTCCACAGAGC-ATAGAACAGATCACGGGCACGGAT 723517 Query 72081 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140 ||||| || || ||||| |||||||||||| | | || ||| | ||||| || Sbjct 723518 TTCCTCCTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAAAACATCCGCGTGCCATGG 723577 Query 72141 TTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 72200 || | ||| || || | | || || || |||||||| ||||| || | || | || Sbjct 723578 CTCAAGGTAGATTGCAAAGGCACCAGGGCGCTTGTTTCCACCCTGGTCGACATAGCGGGC 723637 Query 72201 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 72260 ||||| || || || | | ||| || | ||||| || || | ||| || || ||| Sbjct 723638 AGTGTTGTTGTACACACGGAGCATGGGGACGATACCGTTAGAGGTACCGTTAGTTCCGCC 723697 Query 72261 GATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTT 72320 || || ||| | |||||||| | || ||||| || || || || | || Sbjct 723698 AATGTAAGAGCCAGTCGCACGAATGCGGTGGATGTTCAGACCGATACCACCAGCAGTCTT 723757 Query 72321 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380 ||||| | || || || || || |||||||| ||||| || || || ||| |||| Sbjct 723758 GGAGATCATGGCACAGGTCTTCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCAT 723817 Query 72381 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 72440 || || || || || || || ||| | | || || || || || | |||||| Sbjct 723818 GTCAACCAGGAAGCAAGAAGCCAGCTGGGGCTGCGGGGTACCAGCGTTGAACAGGGTAGG 723877 Query 72441 AGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT 72500 ||||||||| || || | |||| ||||| | | ||| |||||||| || || || Sbjct 723878 AGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGGTCTCAATGGCCTTCTCAAT 723937 Query 72501 ATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGAT 72560 |||| | ||| || || || || |||||||| |||| |||||||| | ||| | | Sbjct 723938 ATCCTCTCCATGAATACCAACAGCAACACGCATCAACAGGTGCTGAGGACGCTCAGCAAC 723997 Query 72561 CTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620 ||| || || | || || || |||| ||| || || || || ||||||| Sbjct 723998 CTTTCCATCGATACGGAGCAGATATGAACGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTA 724057 Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTAT 72680 ||||| || ||||| | ||| | || || || | ||| || || |||| || Sbjct 724058 GTTGAAGTCACGGTCGTACACAATGGCAGAGTTAAGCTCATCTGCATGCTTTGTAACAAT 724117 Query 72681 ATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 72739 | ||| | || || || || || |||| | || | ||| || || || ||||||| Sbjct 724118 CT-CATAGATATTTTTGGAGATCATAGGAGCGGGCTTGCTATTCTTGGGGTTGACATAGT 724176 Query 72740 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 72799 | | | ||| || || | |||| | || || || | |||||| || || || | Sbjct 724177 GGTAGAGATCGGAGATGACCATAGAAAATTGCTTCTTGGTCTGCTTGTGAAGGTTGGAGA 724236 Query 72800 CGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837 |||| || | || || ||||| ||||| || || ||| Sbjct 724237 CGGCAATACGAGCTGCCAGAATAGCATAGTCGGGGTGT 724274 >seq4 Length=1993899 Score = 138 bits (152), Expect = 2e-27 Identities = 290/429 (68%), Gaps = 5/429 (1%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| || ||||||||||||||| | || | |||||||| || || || Sbjct 1571309 CAGGCGAAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAGA 1571250 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 |||||||| || |||||||| || ||||| || ||||| || || || ||||| |||||| Sbjct 1571249 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAG 1571190 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 42241 || || || || || || ||||||| || | || | || ||| ||| | Sbjct 1571189 ATACCCTCGACGGCAGCGAAGGCAACCAGACGGGAAGCAAAGGTGGAGTCACGGTCGTTG 1571130 Query 42242 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 ||||| | || ||||| |||||||| || | ||||| || || || ||||||| Sbjct 1571129 ATCCAGCGGATG-GCCCAGTCGGCCTTACGCTTGATGCAAGGAATAGTCTCAATGGCATC 1571071 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 ||||| ||| | | || || || | || |||||||| | |||| || | Sbjct 1571070 GAAGAGGTAGGTGCGCTGCTTGGGCTCCTTGATGTAGGTATCGATGAGAAGAGAGTAGGT 1571011 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 || || || ||||| || || ||||| || |||||||| || | ||||| || || Sbjct 1571010 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCAGTGAC 1570951 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480 ||| || || | || || || ||| | | || || || || || |||||| ||| || Sbjct 1570950 CTGGACCTCAGCACTGAAACGCTCAACAAGGTTCTCATTAACAATGCCGTCAGAGGCAGC 1570891 Query 42481 AAAAAACGC 42489 || || || Sbjct 1570890 GAAGAAAGC 1570882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138495303840