Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24]
84 sequences; 32,109,558 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq12 176 6e-39
seq4 138 2e-27
>seq12
Length=1129212
Score = 176 bits (194), Expect = 6e-39
Identities = 533/818 (65%), Gaps = 4/818 (0%)
Strand=Plus/Plus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 72080
|| || ||||| || ||||| || |||| ||||| ||| || ||||| | || |
Sbjct 723459 ACACGCTTCATGAACAGATCGGGGGTCCACAGAGC-ATAGAACAGATCACGGGCACGGAT 723517
Query 72081 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140
||||| || || ||||| |||||||||||| | | || ||| | ||||| ||
Sbjct 723518 TTCCTCCTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAAAACATCCGCGTGCCATGG 723577
Query 72141 TTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 72200
|| | ||| || || | | || || || |||||||| ||||| || | || | ||
Sbjct 723578 CTCAAGGTAGATTGCAAAGGCACCAGGGCGCTTGTTTCCACCCTGGTCGACATAGCGGGC 723637
Query 72201 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 72260
||||| || || || | | ||| || | ||||| || || | ||| || || |||
Sbjct 723638 AGTGTTGTTGTACACACGGAGCATGGGGACGATACCGTTAGAGGTACCGTTAGTTCCGCC 723697
Query 72261 GATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTT 72320
|| || ||| | |||||||| | || ||||| || || || || | ||
Sbjct 723698 AATGTAAGAGCCAGTCGCACGAATGCGGTGGATGTTCAGACCGATACCACCAGCAGTCTT 723757
Query 72321 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380
||||| | || || || || || |||||||| ||||| || || || ||| ||||
Sbjct 723758 GGAGATCATGGCACAGGTCTTCAAGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCAT 723817
Query 72381 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 72440
|| || || || || || || ||| | | || || || || || | ||||||
Sbjct 723818 GTCAACCAGGAAGCAAGAAGCCAGCTGGGGCTGCGGGGTACCAGCGTTGAACAGGGTAGG 723877
Query 72441 AGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT 72500
||||||||| || || | |||| ||||| | | ||| |||||||| || || ||
Sbjct 723878 AGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGGTCTCAATGGCCTTCTCAAT 723937
Query 72501 ATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGAT 72560
|||| | ||| || || || || |||||||| |||| |||||||| | ||| | |
Sbjct 723938 ATCCTCTCCATGAATACCAACAGCAACACGCATCAACAGGTGCTGAGGACGCTCAGCAAC 723997
Query 72561 CTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620
||| || || | || || || |||| ||| || || || || |||||||
Sbjct 723998 CTTTCCATCGATACGGAGCAGATATGAACGCTCCAGAGTCTTGAAGCCGAAGAAGTTGTA 724057
Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTAT 72680
||||| || ||||| | ||| | || || || | ||| || || |||| ||
Sbjct 724058 GTTGAAGTCACGGTCGTACACAATGGCAGAGTTAAGCTCATCTGCATGCTTTGTAACAAT 724117
Query 72681 ATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 72739
| ||| | || || || || || |||| | || | ||| || || || |||||||
Sbjct 724118 CT-CATAGATATTTTTGGAGATCATAGGAGCGGGCTTGCTATTCTTGGGGTTGACATAGT 724176
Query 72740 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 72799
| | | ||| || || | |||| | || || || | |||||| || || || |
Sbjct 724177 GGTAGAGATCGGAGATGACCATAGAAAATTGCTTCTTGGTCTGCTTGTGAAGGTTGGAGA 724236
Query 72800 CGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837
|||| || | || || ||||| ||||| || || |||
Sbjct 724237 CGGCAATACGAGCTGCCAGAATAGCATAGTCGGGGTGT 724274
>seq4
Length=1993899
Score = 138 bits (152), Expect = 2e-27
Identities = 290/429 (68%), Gaps = 5/429 (1%)
Strand=Plus/Minus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| ||||| || ||||||||||||||| | || | |||||||| || || ||
Sbjct 1571309 CAGGCGAAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAGA 1571250
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|||||||| || |||||||| || ||||| || ||||| || || || ||||| ||||||
Sbjct 1571249 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAG 1571190
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 42241
|| || || || || || ||||||| || | || | || ||| ||| |
Sbjct 1571189 ATACCCTCGACGGCAGCGAAGGCAACCAGACGGGAAGCAAAGGTGGAGTCACGGTCGTTG 1571130
Query 42242 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300
||||| | || ||||| |||||||| || | ||||| || || || |||||||
Sbjct 1571129 ATCCAGCGGATG-GCCCAGTCGGCCTTACGCTTGATGCAAGGAATAGTCTCAATGGCATC 1571071
Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360
||||| ||| | | || || || | || |||||||| | |||| || |
Sbjct 1571070 GAAGAGGTAGGTGCGCTGCTTGGGCTCCTTGATGTAGGTATCGATGAGAAGAGAGTAGGT 1571011
Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420
|| || || ||||| || || ||||| || |||||||| || | ||||| || ||
Sbjct 1571010 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCCTCAGTGAC 1570951
Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480
||| || || | || || || ||| | | || || || || || |||||| ||| ||
Sbjct 1570950 CTGGACCTCAGCACTGAAACGCTCAACAAGGTTCTCATTAACAATGCCGTCAGAGGCAGC 1570891
Query 42481 AAAAAACGC 42489
|| || ||
Sbjct 1570890 GAAGAAAGC 1570882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138495303840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |