Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6 179 6e-41 seq9 165 1e-36 >seq6 Length=1653896 Score = 179 bits (198), Expect = 6e-41 Identities = 192/251 (76%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | || || |||||||| || ||||| ||||| ||||| Sbjct 1195583 GCCAAGCGTCACCGCAAGATCT-TACGTGACAACATCCAGGGTATCACTAAGCCCGCTAT 1195641 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| |||||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 1195642 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 1195701 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || |||| ||| ||| | ||| || || Sbjct 1195702 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTTACCTACACTGA 1195761 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || | ||||| || | || || || || Sbjct 1195762 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 1195821 Query 16672 CCGTAAGATTT 16682 ||||||| ||| Sbjct 1195822 CCGTAAGTTTT 1195832 >seq9 Length=1158989 Score = 165 bits (182), Expect = 1e-36 Identities = 199/268 (74%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| | | || || ||||| || || ||||||||||| ||||| Sbjct 252213 GCCAAGCGCCACCGTAAGATTT-TGCGTGACAACATTCAGGGTATCACCAAGCCCGCTAT 252155 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 252154 CCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 252095 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||| || | || || | ||| || || ||| || || Sbjct 252094 CCGTGGTGTCCTCAAGACTTTCCTTGAGTCTGTCATTCGTGACGCCGTCACCTACACTGA 252035 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| |||||||| || || ||| | ||| | ||||| || | || || || || Sbjct 252034 GCACGCTAAGCGTAAGACCGTGACTTCCCTTGATGTTGTCTACGCTCTCAAGCGCCAGGG 251975 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| | || ||||| || ||||| Sbjct 251974 CCGTACCCTCTACGGTTTCGGTGGTTAA 251947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075123198212