Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq60 140 2e-28 seq9 100 2e-16 seq20 82.4 5e-11 >seq60 Length=8845 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 912 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 853 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 852 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 818 >seq9 Length=1158989 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | ||||| ||||||||| |||||| || || ||||||||||| Sbjct 442027 ACCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGA 441968 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | || | || || | || || || ||||| || || || ||||| |||| || Sbjct 441967 AAGGGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGAGG 441908 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || || || |||||| ||| || |||||| || | || ||||| | || || Sbjct 441907 GATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTATCGGAAGACTCCAC 441848 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| | ||| || || || || ||||| || || ||||| |||||||| Sbjct 441847 TTCCAGTGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 441800 >seq20 Length=489032 Score = 82.4 bits (90), Expect = 5e-11 Identities = 174/257 (68%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 6232 CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAA-CATGCCTGAAGTC 6290 ||||| ||||||||||||| |||||||| || |||||||| ||||| | || || ||| Sbjct 139655 CCAAGATCGAGGGTAAGGGTAACGGTATCAAGACCGTCATCGTCAACCTTGACT-CCGTC 139713 Query 6291 GCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGC 6350 ||| | || | || ||| | |||||| | ||||| ||||| | ||| | || Sbjct 139714 GCTCGATCTCTGAGCCGTCCTCCTGCCTACCTCATTAAATACTTCGGTTTTGAATTGGGT 139773 Query 6351 GCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCT 6410 ||||| | | | | || |||| || | ||| | ||||| | || || || Sbjct 139774 GCTCAAGCCAACGCCAAGCCCACTGACGAACGTTGGATCATCAACGGCGCTCACGACGCT 139833 Query 6411 GCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGC 6470 | ||||| ||||| | || || ||||| || |||||| || || || | | ||| Sbjct 139834 CCTAAGCTCCAGGATTACCTGGATGGCTTCATCTCCAAGTTCGTTCTTTGCAAGAAGTGC 139893 Query 6471 GATAACCCGGAGACCGA 6487 | ||||| |||||||| Sbjct 139894 AAGAACCCTGAGACCGA 139910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946857097804