Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq9 113 4e-20 seq36 89.7 4e-13 >seq9 Length=1158989 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||||||||| || |||||||| | ||||||||||| || Sbjct 441800 ATGCAGATCTTCGTTAAGACTTTGACCGGCAAGACCATCACACTGGAAGTGGAGTCTTCC 441859 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| ||||| || || ||||| || || || || || |||||| Sbjct 441860 GATACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAA 441919 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| ||||| || || || | ||||||| || || | |||||||| Sbjct 441920 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACCCTTTCTGATTACAAC 441979 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || | ||||| Sbjct 441980 ATCCAGAAGGAGTCCACTCTTCACCTGGTGCT 442011 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || || || | ||||| | || || || || || Sbjct 441572 ATGCAGATCTTCGTTAAGACTCTCACTGGCAAGACTATCACTCTGGAGGTTGAATCATCA 441631 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| || || || || || |||||||||| Sbjct 441632 GACACAATCGA--CAATGTAAAGAGCAAGATCCAAGATAAGGAGGGTATCCCACCTGACC 441689 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | ||||| |||||||| ||| | || |||| ||||| | ||| |||| Sbjct 441690 AACAACGTCTCATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACCCTTTCCGACTACA 441749 Query 25177 ATATTCAAAAAGAATCCAC 25195 | || ||||| || || || Sbjct 441750 ACATCCAAAAGGAGTCTAC 441768 >seq36 Length=120939 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| |||| ||||| |||| || |||| || |||||| ||||| ||| Sbjct 17122 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 17063 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || | ||| || ||| ||||| || || ||||| |||||||||||||| | Sbjct 17062 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAACAGCGCCTG 17003 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || || || ||||| || | || |||| |||||| || |||| ||||| || || || Sbjct 17002 ATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 16944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327556380460