Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq9 140 3e-28 seq36 82.4 6e-11 >seq9 Length=1158989 Score = 140 bits (154), Expect = 3e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| ||||| ||||| || || |||| || |||||||| | || Sbjct 441800 ATGCAGATCTTCGTTAAGACTTTGACCGGCAAGACCATCACACTGGAAGTGGAGTCTTCC 441859 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || || ||||| |||||||||||||| || ||||| ||| Sbjct 441860 GATACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAA 441919 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| || || ||| | || ||| ||| ||| | || ||||||||| Sbjct 441920 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACCCTTTCTGATTACAAC 441979 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 441980 ATCCAGAAGGAGTCCAC 441996 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| ||| | || || || || ||||||| || || ||| | | Sbjct 441572 ATGCAGATCTTCGTTAAGACTCTCACTGGCAAGACTATCACTCTGGAGGTTGAATCATCA 441631 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || ||||| ||||||||||| ||||| || ||| Sbjct 441632 GACACAATCGACAATGTAAAGAGCAAGATCCAAGATAAGGAGGGTATCCCACCTGACCAA 441691 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || |||||||| || | |||||| ||||||| | ||||| |||||| Sbjct 441692 CAACGTCTCATTTTCGCCGGCAAGCAACTTGAGGATGGCCGCACCCTTTCCGACTACAAC 441751 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| || || || Sbjct 441752 ATCCAAAAGGAGTCTAC 441768 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||||||||| || || ||| ||| ||| | ||| || |||| Sbjct 441069 ACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGACACCATCGACAATGTCAAGTCC 441128 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || || |||||||| | || || || || || Sbjct 441129 AAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAACAACGCTTGATCTTCGCTGGAAAG 441188 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| ||||||| | ||||| ||||| || || || |||||||| | || Sbjct 441189 CAGCTGGAGGATGGCCGCACCCTTTCCGACTACAATATCCAGAAGGAATCCACTCTCCAC 441248 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || |||| |||| || ||| Sbjct 441249 CTGGTCCTGCGCCTGCGTGGTGGT 441272 Score = 105 bits (116), Expect = 6e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 || ||||| | || || || || |||| ||||| || || ||| ||||||| | || Sbjct 441356 GTCAAAACCCTGACTGGCAAGACTATCACCCTTGAGGTTGAGTCCAGCGATACCATCGAT 441415 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 | |||| || || || ||||||||||| ||||| ||||| ||||| ||||| || Sbjct 441416 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAACAGCGTCTCATC 441475 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || || || || || | |||||| || || | ||||| ||||||||||| |||||| Sbjct 441476 TTCGCTGGAAAGCAACTTGAGGATGGACGTACTCTGTCCGACTACAACATTCAGAAAGAA 441535 Query 22411 TCCACC 22416 || ||| Sbjct 441536 TCTACC 441541 >seq36 Length=120939 Score = 82.4 bits (90), Expect = 6e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 17123 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCAT 17064 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || ||||||||||||||||| || || ||||| || || Sbjct 17063 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAACAGCGCCT 17004 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || || ||||| ||| | |||||| |||||| | ||| |||||||| || || Sbjct 17003 GATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 16944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727570303460