Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq9 123 6e-23 seq36 111 4e-19 seq4 91.5 3e-13 >seq9 Length=1158989 Score = 123 bits (136), Expect = 6e-23 Identities = 160/220 (73%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| || |||||| || || || ||||||| Sbjct 441570 CCACCACGCAGACGGAGGACCAGGTGAAGGGTAGATTCTTTCTGAATGTTGTAGTCGGAC 441511 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||| || || | ||| ||||| |||||||| ||||||||||| || ||| Sbjct 441510 AGAGTACGTCCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTG---GTCGGGG 441454 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || | || ||||| || || | |||||| || || Sbjct 441453 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTATCGATGGTATCGCTGGACTCA 441394 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || || || ||||| ||||| || ||||| || ||||||| Sbjct 441393 ACCTCAAGGGTGATAGTCTTGCCAGTCAGGGTTTTGACGA 441354 Score = 116 bits (128), Expect = 9e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || || || |||| ||| || || ||||| || || || Sbjct 442029 TGACCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCA 441970 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || || || || ||||| | || || || || ||||| ||||||||||| Sbjct 441969 GAAAGGGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGA 441910 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| || || || ||||| || || ||| |||||||| || || | |||| || || Sbjct 441909 GGGATACCCTCCTTGTCCTGAATCTT-GCTCTTCACGTTGTCGATGGTATCGGAAGACTC 441851 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 441850 CACTTCCAGTGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 441800 >seq36 Length=120939 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || || || ||||||||| Sbjct 16944 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 17003 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || |||||||| | || || || || || |||||||| || | || ||||| || Sbjct 17004 AGGCGCTGTTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 17063 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 17064 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 17122 >seq4 Length=1993899 Score = 91.5 bits (100), Expect = 3e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176 |||||||| | ||||||| | || || || || |||| ||||| ||| | || ||| Sbjct 1571390 AAGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAAGCTGATGT 1571449 Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGT 269236 || || || || ||||| ||||| ||| || | || ||||| | |||| | Sbjct 1571450 GCCAGTACATTGAGTTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGAAACCAGAAGTACT 1571509 Query 269237 ACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACT 269296 |||| || || ||||||| ||| ||||| || || || | || ||||| |||| Sbjct 1571510 ACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCCGGCAAGACCAACT 1571569 Query 269297 TCTTCGAAAAGCGTGTCAGCGACTATCA 269324 ||||||| ||||||||| | ||||| || Sbjct 1571570 TCTTCGAGAAGCGTGTCGGTGACTACCA 1571597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653130396952