Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq11 114 3e-20 seq4 93.3 9e-14 >seq11 Length=1134361 Score = 114 bits (126), Expect = 3e-20 Identities = 187/269 (70%), Gaps = 3/269 (1%) Strand=Plus/Minus Query 333725 CTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATG 333784 ||| ||||| |||| || || || ||| || |||||| || | ||||| || Sbjct 1077888 CTTGACGAAATCGGCAAGGTTACCGGGGTAGTTAACCAGCTTC---TTCTGCTCGTAGTG 1077832 Query 333785 GATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGA 333844 | ||| |||||| || |||||||||| || |||||||| || || |||| | | Sbjct 1077831 GTAAATGTCGGTGCAGACCTCGTCGAGGAAGCCAGAGTCGTGAGAGACGATCAAACTGGT 1077772 Query 333845 AACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATG 333904 | ||| | | || | |||||||| ||||||| | ||||| | ||| | ||| Sbjct 1077771 GATGTCGGTGTGCTTCTTGAGGTATTCCTGCAGCCACTTGACGTTCGCAACATCCAAATG 1077712 Query 333905 GTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGC 333964 ||| || || ||||||||||| || | | || ||||| ||||| ||||| || ||||| Sbjct 1077711 GTTAGTAGGTTCGTCAAGAAGCAGAACATCAGCCTTCAGAAGCATGGCACGGGCCAGAGC 1077652 Query 333965 GAGTTTCATTTTCCACCCTCCTGAAAGAG 333993 || ||||| ||||| || || || |||| Sbjct 1077651 AAGCTTCATCTTCCAACCACCAGACAGAG 1077623 >seq4 Length=1993899 Score = 93.3 bits (102), Expect = 9e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603 |||||| |||| ||| || | ||||||||| | | || ||| | |||||||| || Sbjct 1571404 GACGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAAGCTGATGTGCCAGTACATTGAG 1571463 Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663 ||||| || ||||| | | |||| || || | |||| |||||||| ||| Sbjct 1571464 TTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGAAACCAGAAGTACTACAACTCTGCCAAC 1571523 Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723 ||||| | ||| |||||| ||| || || || || || ||||||||||| |||||| Sbjct 1571524 CCCTTCGACTTCATGGAGTCCATCTCCCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGT 1571583 Query 243724 GTCAGTGATTATCA 243737 ||| |||| || || Sbjct 1571584 GTCGGTGACTACCA 1571597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878813025400