Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq9 170 4e-37 seq12 114 3e-20 seq36 113 1e-19 seq3 95.1 3e-14 >seq9 Length=1158989 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||||||||| || || || |||||||| | ||| || | |||||||| Sbjct 442008 ACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGAAAGGGTCCGGCCATCTTCC 441949 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || |||||||| || |||||||| ||||| || || || ||||| ||| Sbjct 441948 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGAGGGATACCCTCCTTGTCCTGA 441889 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || ||||| || ||| |||||||| || || | ||||| Sbjct 441888 ATCTTGCTCTTCACGTTGTCGATGGTATCGGAAGACTCCACTTCCAGTGTGATGGTCTTG 441829 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||||||| || ||||| | ||||| Sbjct 441828 CCGGTCAAAGTCTTAACGAAGATCTGCAT 441800 Score = 125 bits (138), Expect = 2e-23 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| |||||||| || || || |||||||| |||| ||| || | ||||| || Sbjct 441253 ACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGGCCATCCTCC 441194 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | ||||||||||| ||||| ||||| || ||||| || Sbjct 441193 AGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 441134 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || |||||| || || |||||||| Sbjct 441133 ATCTTGGACTTGACATTGTCGATGGTGTC 441105 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| ||||| || ||||| |||| ||| || | ||||| || || ||||| || Sbjct 441768 GTAGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCG 441709 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 ||||| || || ||||||||||| || || || || || || ||||| || || ||| Sbjct 441708 GCGAAAATGAGACGTTGTTGGTCAGGTGGGATACCCTCCTTATCTTGGATCTTGCTCTTT 441649 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || || || ||||| || ||| || || || || | ||||| || || | ||| Sbjct 441648 ACATTGTCGATTGTGTCTGATGATTCAACCTCCAGAGTGATAGTCTTGCCAGTGAGAGTC 441589 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 441588 TTAACGAAGATCTGCAT 441572 >seq12 Length=1129212 Score = 114 bits (126), Expect = 3e-20 Identities = 192/278 (69%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 ||||| || | ||||| ||||||| ||||||||| | || | | ||| || || ||| Sbjct 723499 TTCTATGCTCTGTGGACCCCCGATCTGTTCATGAAGCGTGTCGAGGCCAACGGAGACTGG 723440 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | ||| ||||| ||||| || || || || || | |||||| |||||| ||||||||| Sbjct 723439 ACCCTGTTCTGCCCCAACGAGGCCCCCGGCCTGGCTGATGTCTATGGTGATGAGTTCGAG 723380 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768 |||| || || | || || || ||||| | | | | | |||||||| | Sbjct 723379 GCTCTCTACGAGCGCTATGAGAAGGAGGGCCGCGGCCGTTCCACCATCAAGGCCCAGAAG 723320 Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828 |||||| || |||||||| || || |||| |||| ||||| || |||||| Sbjct 723319 CTGTGGTATGCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTCTACAAG 723260 Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866 ||||| | ||||| |||||||||||||| || Sbjct 723259 GATGCTTGCAACAAGAAGAGCAACCAGAAGAACTTGGG 723222 >seq36 Length=120939 Score = 113 bits (124), Expect = 1e-19 Identities = 135/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| ||||| | ||||| ||||||||||| || |||||||| Sbjct 16944 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 17003 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || |||||||| || ||||| || || ||||| || || || ||||||||| || Sbjct 17004 AGGCGCTGTTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 17063 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || |||| || || ||| Sbjct 17064 ATGGTGTCGCTCGA---CTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 17120 Query 195130 AA 195131 || Sbjct 17121 AA 17122 >seq3 Length=1995436 Score = 95.1 bits (104), Expect = 3e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||| || | || || | ||||| ||| Sbjct 1037794 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCATCCTCG 1037853 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||||||||||| |||||||| || || |||||||| || || || || || |||||| Sbjct 1037854 AGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCT 1037910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480405920428