Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4 147 3e-29 seq12 116 6e-20 seq17 102 1e-15 seq1 95.1 2e-13 >seq4 Length=1993899 Score = 147 bits (162), Expect = 3e-29 Identities = 212/294 (72%), Gaps = 9/294 (3%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 || ||||||||||| || |||||||||||||| ||||| | |||| ||| ||||| Sbjct 1571252 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAG 1571193 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||| ||||||||||| || ||| | || || || ||||| ||| || | | | Sbjct 1571192 AAGATACCCTCGACGGCAGCGAAGGCAACCAGACGGGAAGCAAAGGTGG--AGTCACGGT 1571135 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556 ||||||||| || ||||| || ||||| | | | | || | || || ||| Sbjct 1571134 C-GTTGATCCAGCGGATGGCCCAGTCGGCCTTACGCTTGATGCAAGGAATAGTCTCAATG 1571076 Query 794557 GCGCGAAAGAGGT-GGTCC--TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGC 794613 || ||||||| ||| | | || | || ||||||| |||||| |||||||| || Sbjct 1571075 GCATCGAAGAGGTAGGTGCGCTGCTTG---GGCTCCTTGATGTAGGTATCGATGAGAAGA 1571019 Query 794614 GAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||||||||||| ||||||||||| || || ||||||||| || || |||||| Sbjct 1571018 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAG 1570965 Score = 129 bits (142), Expect = 9e-24 Identities = 178/246 (72%), Gaps = 5/246 (2%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || || || || ||| |||||| |||||||||||||| | || ||||| ||||||| Sbjct 1571594 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGGACTCCATG 1571535 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| |||||||| | ||||| ||||| | ||||| | | || || ||| Sbjct 1571534 AAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTTCCGAGAGCGACCAGGAGACGG 1571475 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGA--TGAGCGCCA 794085 || |||||||| ||||||||||||||||| || |||||||||||||| |||||| | Sbjct 1571474 TCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGCAGAGCGCAA 1571415 Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCC 794145 || || | || | | ||||||| ||| || | || ||||| | |||||| | || Sbjct 1571414 --GGAAGAGCGTCAGTCAGGAACTCTTGCTCAATGCCAACAGCCTCAACGATGATGT-CC 1571358 Query 794146 TGGGCA 794151 ||| || Sbjct 1571357 TGGACA 1571352 >seq12 Length=1129212 Score = 116 bits (128), Expect = 6e-20 Identities = 259/395 (66%), Gaps = 0/395 (0%) Strand=Plus/Plus Query 2071610 TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGG 2071669 |||| |||| ||||| ||||||||| || |||| || ||||||| |||||| ||| Sbjct 723217 TGGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGG 723276 Query 2071670 GCGCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCG 2071729 | ||| |||||| |||| ||| | |||||| |||| | | | || | | Sbjct 723277 GGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCATACCACAGCTTCTGGGCCTTGATGG 723336 Query 2071730 AGGTCCTCGCGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGT 2071789 || | ||||||||| |||| || || || | | || | Sbjct 723337 TGGAACGGCCGCGGCCCTCCTTCTCATAGCGCTCGTAGAGAGCCTCGAACTCATCACCAT 723396 Query 2071790 GGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCA 2071849 | || ||||||||| |||||| ||||| || || | |||||| ||| | | Sbjct 723397 AGACATCAGCCAGGCCGGGGGCCTCGTTGGGGCAGAACAGGGTCCAGTCTCCGTTGGCCT 723456 Query 2071850 CCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGT 2071909 | || || ||| ||||| ||| |||||||| | || || ||||| || || ||| Sbjct 723457 CGACACGCTTCATGAACAGATCGGGGGTCCACAGAGCATAGAACAGATCACGGGCACGGA 723516 Query 2071910 TCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACG 2071969 | |||||||| ||||||||||| || ||||| | |||| | || |||||||| | Sbjct 723517 TTTCCTCCTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAAAACATCCGCGTGCCATG 723576 Query 2071970 GCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTG 2072004 |||| |||||| |||||||| || ||||||| Sbjct 723577 GCTCAAGGTAGATTGCAAAGGCACCAGGGCGCTTG 723611 >seq17 Length=656861 Score = 102 bits (112), Expect = 1e-15 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || |||||||||||||| || ||||||||| |||| ||||| ||| | | Sbjct 636184 GTACTTGGTAACAGCCTTGGTACCCTCAGAAACGGCGTGCTTGGCAAGTTCACCGGGGAG 636125 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||| ||||||| |||||||||||| || | ||| ||| |||||| || | Sbjct 636124 GATCAACCGCACGGAGGTCTGGATCTCTCGAGAAGAGATGGTGGACTTCTTGTT-GTAAG 636066 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632 | ||||| | |||||| ||| ||| || |||| ||||| Sbjct 636065 CAGCCAGCTTGGAGGCCTCAGTGGCGACACGCTCGAAGATGTC 636023 >seq1 Length=3516887 Score = 95.1 bits (104), Expect = 2e-13 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||||| || |||||| | || || ||| | || |||||||| || || || Sbjct 3458693 GCTGCCAACTACCTAGATATCAAGGCTCTTCTGGATGTCGGTTGCAAGACTGTCGCAAAT 3458752 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 | || ||||||||||| |||||||| |||||||| || || ||||| Sbjct 3458753 ATGATTAAGGGCAAGTCCCCCGAGGAGATCCGCAAAACTTTCAACAT 3458799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916237464536876