Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq12 224 1e-53 seq4 114 2e-20 seq3 87.8 2e-12 >seq12 Length=1129212 Score = 224 bits (248), Expect = 1e-53 Identities = 575/866 (66%), Gaps = 21/866 (2%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||| | || ||||| ||||| ||||| ||| || | ||||||| | | Sbjct 723129 GGGAGGGCAAGGGAGGCCAAGTTGCAGACAGCGACCTCGTCAGGGGCACTGTACTCGATA 723188 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || ||||| |||||||| || || || ||||| ||||| ||||| ||||||||| Sbjct 723189 ATCTCGGTACACAAGTTGGAGCTGCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTCTTG 723248 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| |||||||||||||||||| |||| | || ||||| ||||| | | || || Sbjct 723249 TTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATG 723308 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCG--TTGGCC-CGTCCCTCCGCCTCGTA 111465 || | ||| | | || | | || | |||| | |||| || |||||| ||| || Sbjct 723309 GCATACCACAGCTTCTGGGCCTTG----ATGGTGGAACGGCCGCGGCCCTCCTTCTCATA 723364 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 |||||| || || ||||| ||||| | || | || || || |||| || Sbjct 723365 GCGCTCGTAGAGAGCCTCGAACTCATCACCATAGACATCAGCCAGGCCGGGGGCCTCGTT 723424 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || ||||| || | ||| | || |||| || ||||||||||| || || || | Sbjct 723425 GGGGCAGAACAGGGTCCAGTCTCCGTTGGCCTCGACACGCTTCATGAACAGATCGGGGGT 723484 Query 111586 CCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644 |||||| | | || ||||| | ||| || || || | ||| ||||| || | Sbjct 723485 CCACAGAGCATAGAACAGATCACGGGCACGGA-TTTCCTCCTTACCGTGGTTCTTGCGGA 723543 Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCT 111704 || |||||||| | | ||||||||||||||||||||| |||| ||| | | || Sbjct 723544 GATCGAGGAACTCGAAAACATCCGCGTGCCATGGCTCAAGGTAGATTGCAAAGGCACC-- 723601 Query 111705 TTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 | ||| ||| | || | |||||||| || ||| ||| | || || |||| Sbjct 723602 -AGGGCGCTTGTTTCCACCCTGGTCGACATAGCGGGCAGTGTTGTTGTACACACGGAGCA 723660 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818 | || | ||||| | || ||| || || || | ||| ||| | | || | | Sbjct 723661 TGGGGACGATACCGTTAGAGGTACCGTTAGTTCCGCCAATGTAAGAGCCAGTCGCACGAA 723720 Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 ||||||| || || ||||| ||||| ||| ||||| ||||| | | | Sbjct 723721 TGCGGTGGATGTTCAGACCGATACCACCAGCAGTCTTGGAGATCATGGCACAGGTCTTCA 723780 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 || |||||||||| | || ||||||||| || | | ||||||||| | || Sbjct 723781 AGGTGTCATAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAGGAAGCAAGAAGCCA 723840 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CT 111997 ||| || || |||||||| ||||| ||||| || | |||||| |||| ||| | Sbjct 723841 GCTGGGGCTGCGGGGTACCAGCGTTGAACAGGGTAGGAGAAGCGTGAGTGAA-GTACTTT 723899 Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 || |||||| || ||| ||||| | | | ||||| || || || || || || | Sbjct 723900 TGAGACATCAAGTGGTAGGTCTCAATGGCCTTCTCAATATCCTCTCCATGAATACCAACA 723959 Query 112058 GCGACCCGCATGAACATGTACTGTGG 112083 || || ||||| |||| || ||| || Sbjct 723960 GCAACACGCATCAACAGGTGCTGAGG 723985 >seq4 Length=1993899 Score = 114 bits (126), Expect = 2e-20 Identities = 277/417 (66%), Gaps = 2/417 (0%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| |||||||| |||||||||||||| || | ||| ||| ||||| Sbjct 1571594 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGGACTCCATG 1571535 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAA-ATGGGTGGCACCCCAACTTGTTTGAGGAGACG 122489 ||||| || || || | ||| | | ||| || | | |||||||| Sbjct 1571534 AAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTTCCGAGAGCGACC-AGGAGACG 1571476 Query 122490 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 122549 || | || |||||||||||| | ||||| || | |||||| |||| || || Sbjct 1571475 GTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGCAGAGCGCA 1571416 Query 122550 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 122609 || || ||||| | |||| ||| |||||| |||| ||||| | |||| | || Sbjct 1571415 AGGAAGAGCGTCAGTCAGGAACTCTTGCTCAATGCCAACAGCCTCAACGATGATGTCCTG 1571356 Query 122610 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTG 122669 || | | | |||| | || || ||| || ||| || || Sbjct 1571355 GACAACCTGCTTGCTGGGGCGGTTGTTCAGGTGGGAGAACAGAAGGCAGGCGAAGTCAGT 1571296 Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| ||||||||||| ||||| || || || || |||||| ||||| ||||||||||| Sbjct 1571295 GTGCAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACC 1571236 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 122786 |||||||| | ||| | |||| | ||| || || ||||||||||||||||| || Sbjct 1571235 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCGAC 1571179 >seq3 Length=1995436 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 |||||||||||||||||||||| || || || ||| | |||||| || | || ||| Sbjct 1480392 GCATCAATCTCATCAATGAAGATGATGCAAGGAGTATTCTTGCGGGCATTTGCGAACAGA 1480333 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-CA 11748 || || || | || ||| |||||||| |||||||| || || | | || | || Sbjct 1480332 TCACGGACACGAGAGGGACCAACACCAACGAACATCTCAACGAATTCGGAACCACTGACA 1480273 Query 11749 CTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 || | ||| || || |||||||| ||| | || || || || ||||| || || Sbjct 1480272 CTATA-GAAAGGCACGCCAGATTCACCAGCGGTAGCCTTAGCAAGAAGAGTCTTACCAGT 1480214 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 ||| || || | ||||| || || ||||| ||||| ||||| Sbjct 1480213 ACCAGGGGGTCCAGAGAGAATAGCACCGCGGGGAATCTTAGCACC 1480169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031340566400