Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq9 159 8e-34 seq51 116 9e-21 seq36 116 9e-21 seq3 91.5 4e-13 >seq9 Length=1158989 Score = 159 bits (176), Expect = 8e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || ||||| |||||||| || || |||| |||||||| | | || Sbjct 442020 CGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGAAAGGGTC 441961 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| |||||||| ||||| |||||||| || ||||||||||| || ||||| Sbjct 441960 CGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGAGGGATACCC 441901 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| |||||| |||||||| || || | ||||| || | Sbjct 441900 TCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTATCGGAAGACTCCACTTCCAGT 441841 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| |||||||| || | ||| | ||||| Sbjct 441840 GTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 441800 Score = 150 bits (166), Expect = 4e-31 Identities = 152/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| ||||||||||||||||| || |||| |||||| |||| | || Sbjct 441266 ACGCAGGCGCAGGACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGAAAGGGT 441207 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| | ||||||||||| || || || || Sbjct 441206 GCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCAGGAGGGATGCC 441147 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||||||||| || || || || | Sbjct 441146 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAG 441087 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 441086 AGTGATGGTCTTGCCAGT 441069 Score = 140 bits (154), Expect = 8e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || |||||||| || | ||||| |||| || ||| | ||||| Sbjct 441555 AGGACCAGGTGAAGGGTAGATTCTTTCTGAATGTTGTAGTCGGACAGAGTACGTCCATCC 441496 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||||||||| || || ||||||||||| ||||| || |||||||| Sbjct 441495 TCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCGGGGGGAATGCCCTCCTTGTCC 441436 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||| || || || || || | ||||| ||| Sbjct 441435 TGGATCTTGGACTTGACGTTATCGATGGTATCGCTGGACTCAACCTCAAGGGTGATAGTC 441376 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||| ||||| Sbjct 441375 TTGCCAGTCAGGGTTTT 441359 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| | || || || ||||||| ||||| |||| | || | ||||| Sbjct 441783 AGGACCAAGTGCAATGTAGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCC 441724 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || ||||| || || ||||||||||| || || ||||| ||||| ||| Sbjct 441723 TCAAGTTGCTTGCCGGCGAAAATGAGACGTTGTTGGTCAGGTGGGATACCCTCCTTATCT 441664 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| |||||||| | ||| || || | ||||| ||| Sbjct 441663 TGGATCTTGCTCTTTACATTGTCGATTGTGTCTGATGATTCAACCTCCAGAGTGATAGTC 441604 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | ||||| Sbjct 441603 TTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 441572 >seq51 Length=26005 Score = 116 bits (128), Expect = 9e-21 Identities = 193/276 (70%), Gaps = 7/276 (3%) Strand=Plus/Minus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 ||| ||||||||||| ||| ||||| || | |||||||| |||||| || | Sbjct 18161 AACATTATATTTAATGTTTTCATTATTTTCAGGATTAATAGGTACAGCCTTTTCTGTGTT 18102 Query 7500 TATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCAACTT 7557 ||||| ||||||||| | | || ||| ||| |||| | || ||| |||| | Sbjct 18101 AATAAGATTAGAATTATCAGGACCAGGTGTACAATATATATCAG-----ATAACCAATTA 18047 Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617 || || ||| ||||| || || || | | |||||||||||| | |||||||| | Sbjct 18046 TATAATAGTATAATTACAGCACACGCTATAATGATGATTTTCTTTATGGTTATGCCAGCA 17987 Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677 | ||||| ||||| || |||| || | || ||| | | || | ||| |||||||| Sbjct 17986 TTAATAGGTGGTTTTGGTAATTTCTTATTACCATTATTAGTAGGAGGTCCAGATATGGCA 17927 Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 ||||| || | || ||||||||||| |||||| || Sbjct 17926 TTTCCTAGATTAAATAATATAAGTTTCTGATTATTA 17891 >seq36 Length=120939 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || ||| | ||||| || |||||||| ||||||||||| Sbjct 16944 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 17003 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || |||||||| || |||||||| |||||||| |||||||| ||| || ||| Sbjct 17004 AGGCGCTGTTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 17063 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 17064 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 17122 >seq3 Length=1995436 Score = 91.5 bits (100), Expect = 4e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| ||||| || | | || | ||||| Sbjct 1037791 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCATCC 1037850 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || |||||||| || || ||||| ||||||||| Sbjct 1037851 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCT 1037910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529916538296