Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq12 206 4e-48 seq4 120 4e-22 >seq12 Length=1129212 Score = 206 bits (228), Expect = 4e-48 Identities = 590/906 (65%), Gaps = 2/906 (0%) Strand=Plus/Plus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||| | |||| || || ||||| || | |||||| ||| || ||| || || ||| Sbjct 723371 GTAGAGAGCC--TCGAACTCATCACCATAGACATCAGCCAGGCCGGGGGCCTCGTTGGGG 723428 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 || | || | |||||| || | ||| || || ||||| || ||||| || |||| Sbjct 723429 CAGAACAGGGTCCAGTCTCCGTTGGCCTCGACACGCTTCATGAACAGATCGGGGGTCCAC 723488 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 |||||| || ||||| |||| | ||| || || || ||||| |||||| Sbjct 723489 AGAGCATAGAACAGATCACGGGCACGGATTTCCTCCTTACCGTGGTTCTTGCGGAGATCG 723548 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 || ||||| | || ||| | |||||||| || || || ||||| | | ||||| || Sbjct 723549 AGGAACTCGAAAACATCCGCGTGCCATGGCTCAAGGTAGATTGCAAAGGCACCAGGGCGC 723608 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || || || ||||| || | ||| | ||| ||||| || || || | | ||| || | Sbjct 723609 TTGTTTCCACCCTGGTCGACATAGCGGGCAGTGTTGTTGTACACACGGAGCATGGGGACG 723668 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 ||||||||||| || || || ||||| ||| ||| ||| | || ||||| Sbjct 723669 ATACCGTTAGAGGTACCGTTAGTTCCGCCAATGTAAGAGCCAGTCGCACGAATGCGGTGG 723728 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 ||| | || || || || || |||| || || | || || ||||| || || Sbjct 723729 ATGTTCAGACCGATACCACCAGCAGTCTTGGAGATCATGGCACAGGTCTTCAAGGTGTCA 723788 Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392 ||||||||||| || ||||| ||| |||||| || || || || || || || | Sbjct 723789 TAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAGGAAGCAAGAAGCCAGCTGGGGC 723848 Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGT 78452 || || || || || || | || ||||| || || || || | |||| ||| | Sbjct 723849 TGCGGGGTACCAGCGTTGAACAGGGTAGGAGAAGCGTGAGTGAAGTACTTTTGAGACATC 723908 Query 78453 AGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGC 78512 | | ||| || ||||| || || || ||| | |||||| || || || |||||| Sbjct 723909 AAGTGGTAGGTCTCAATGGCCTTCTCAATATCCTCTCCATGAATACCAACAGCAACACGC 723968 Query 78513 ATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTT 78572 ||||||| |||||||| | ||| | ||| || || | || ||||| Sbjct 723969 ATCAACAGGTGCTGAGGACGCTCAGCAACCTTTCCATCGATACGGAGCAGATATGAACGC 724028 Query 78573 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAA 78632 |||| ||| || || || || ||||||| ||||| | ||||| | ||| |||| Sbjct 724029 TCCAGAGTCTTGAAGCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCAGAG 724088 Query 78633 TTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTTGAAATAATAGGAGAT 78692 || || | |||| | || |||||||| || || | | | || || ||||||| Sbjct 724089 TTAAGCTCATCTGCATGCTTTGTAACAATCTCATAGATATTTTTGGAGATCATAGGAGCG 724148 Query 78693 CGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGt 78752 | | ||| || || || ||||||| | | ||| || || | |||| | Sbjct 724149 GGCTTGCTATTCTTGGGGTTGACATAGTGGTAGAGATCGGAGATGACCATAGAAAATTGC 724208 Query 78753 ttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812 || || || | |||||| || || || || || || | || || ||||||||||| || Sbjct 724209 TTCTTGGTCTGCTTGTGAAGGTTGGAGACGGCAATACGAGCTGCCAGAATAGCATAGTCG 724268 Query 78813 GGATGT 78818 || ||| Sbjct 724269 GGGTGT 724274 >seq4 Length=1993899 Score = 120 bits (132), Expect = 4e-22 Identities = 339/518 (65%), Gaps = 12/518 (2%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || || ||||||||||| || ||||| || |||||||| || || | ||| Sbjct 1571267 TCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCG 1571208 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 ||||| ||||| ||||| || || || ||||| || || || || | | | Sbjct 1571207 AAAGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACCAGACGGGAAGCAAAG 1571148 Query 48303 CTGGCTTC---GTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 ||| || || || ||||| || ||||| || ||||| ||| | ||||| Sbjct 1571147 GTGGAGTCACGGTCGTTGATCCAGCGGATGGCCCAGTCGGCCTTACGCTTGATGCAAGGA 1571088 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCT 48419 || || || || |||| ||||| || | | ||| || || | ||| ||||| Sbjct 1571087 ATAGTCTCAATGGCATCGAAGAGGTAGGTGCGCTGCTTGGGCTCCTTGATGTAGGTATCG 1571028 Query 48420 ATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAA 48479 || | |||| || | |||||||| || || || || ||||| || ||||| || Sbjct 1571027 ATGAGAAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAG 1570968 Query 48480 CATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACT 48539 || | || || |||| ||| ||||| | || || || ||| | | |||||||| || Sbjct 1570967 CAGCGAGCCTCAGTGACCTGGACCTCAGCACTGAAACGCTCAACAAGGTTCTCATTAACA 1570908 Query 48540 ATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATA------TTTTTCG 48593 || || ||| ||||| || || || | || || | || || | ||| Sbjct 1570907 ATGCCGTCAGAGGCAGCGAAGAAAGCAAGAACGTGAGAGACGAAGTAACGCTCATCATCG 1570848 Query 48594 TTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTC 48653 || || | | || | |||||| | | ||| || || | ||| | || || || ||| Sbjct 1570847 TT--CAGGC-GGTTGTGCCAGTCGTGAAGATCCTTGGACAGATCAATCTCCTCGGCGGTC 1570791 Query 48654 CAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 || ||||| ||||| ||||| || ||||| | ||| || Sbjct 1570790 CAGAATGAAGCCTCGGCTTTCTTGTACATTTGCCAAAT 1570753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668070597760