Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq9 138 3e-27 seq36 111 4e-19 seq12 93.3 1e-13 >seq9 Length=1158989 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||| | || || || || ||||| || || ||||| || || Sbjct 441803 CAGATCTTCGTTAAGACTTTGACCGGCAAGACCATCACACTGGAAGTGGAGTCTTCCGAT 441862 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||||||||| || || |||||||| ||||| || Sbjct 441863 ACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAACAG 441922 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || ||||| |||||||| |||| ||| | ||||| ||| || Sbjct 441923 CGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACCCTTTCTGATTACAACATC 441982 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 441983 CAGAAGGAGTCCACTCTTCACCTGGT 442008 Score = 122 bits (134), Expect = 2e-22 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || ||||| || ||||| || | ||||||||||| || ||||| Sbjct 441067 TCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGACACCATCGACAATGTCAAGT 441126 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || |||||||| ||||| ||||| | |||||||| |||| Sbjct 441127 CCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAACAACGCTTGATCTTCGCTGGAA 441186 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || ||||| | || ||| |||| || || |||| || ||||| || || | Sbjct 441187 AGCAGCTGGAGGATGGCCGCACCCTTTCCGACTACAATATCCAGAAGGAATCCACTCTCC 441246 Query 178123 ATCTTGT 178129 | || || Sbjct 441247 ACCTGGT 441253 >seq36 Length=120939 Score = 111 bits (122), Expect = 4e-19 Identities = 135/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 17123 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 17067 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || || ||||| || || Sbjct 17066 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAACAGCG 17007 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||| || || |||||||| ||||| | ||||| ||| || ||| |||| Sbjct 17006 CCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCA 16947 Query 178106 AAA 178108 || Sbjct 16946 GAA 16944 >seq12 Length=1129212 Score = 93.3 bits (102), Expect = 1e-13 Identities = 190/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 214123 CCAAAGTTTTTCTGGTTGCTTTT---GCGGCAAATGGCATCTTTGTATGCGATGAAAGGC 214179 || ||||| ||||||||||| || | |||| ||||| ||||| ||||| || Sbjct 723222 CCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGG 723278 Query 214180 ATTCCCACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACC 214239 | || |||| ||||| |||| ||| || ||| || | |||||||| | | Sbjct 723279 TTACCAGTCTCGGTCTGAGCCTCAAGGATGGCATACCACAGCTTCTGGGCCTTGATGGTG 723338 Query 214240 TTTTTGGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAG 214299 | | | ||||| || || || || || |||| ||| || || ||| ||| Sbjct 723339 GAACGGCCGCGGCCCTCCTTCTCATAGCGCTCGTAGAGAGCCTCGAACTCATCACCATAG 723398 Query 214300 ACATCATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTG 214359 |||||| | || ||||| ||||||||||||||||| || |||| | ||| || || | Sbjct 723399 ACATCAGCCAGGCCGGGGGCCTCGTTGGGGCAGAACAGGGTCCAGTCTCCGTTGGCCTCG 723458 Query 214360 ACTCTTTTCATGAAAAGGTCGGAAGTCCAGATTGCATAAAA 214400 || | |||||||| || |||| ||||| | ||||| || Sbjct 723459 ACACGCTTCATGAACAGATCGGGGGTCCACAGAGCATAGAA 723499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729904484296