Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20steckii_20[genbank_20GCA_5F002072375.1_202017-03-24] 84 sequences; 32,109,558 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq36 138 1e-27 seq9 116 3e-21 seq3 102 8e-17 >seq36 Length=120939 Score = 138 bits (152), Expect = 1e-27 Identities = 142/183 (78%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| || ||||| | || |||||||||||||| ||||| | Sbjct 16942 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 17001 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||||||||||||||| | ||||| | |||||||||| ||| || ||| ||| | Sbjct 17002 TCAGGCGCTGTTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 17060 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 17061 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 17120 Query 41852 AAA 41854 ||| Sbjct 17121 AAA 17123 >seq9 Length=1158989 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || ||| ||||||||| ||||| || || || Sbjct 442026 CCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGAA 441967 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || |||||||| || || || || || ||||||||||| | || Sbjct 441966 AGGGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGAGGG 441907 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || || |||| ||| | | | || ||| |||||||| Sbjct 441906 ATACCCTCCTTGTCCTGAATCTTGCTCTTC-ACGTTGTCGATGGTATCGGAAGACTCCAC 441848 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || |||| ||||| ||||| |||||||| Sbjct 441847 TTCCAGTGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 441800 Score = 107 bits (118), Expect = 2e-18 Identities = 158/222 (71%), Gaps = 10/222 (5%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || || ||||||||||| |||||||| Sbjct 441570 CCACCACGCAGACGGAGGACCAGGTGAAGGGTAGATTCTTTCTGAATGTTGTAGTCGGAC 441511 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || || ||||| || ||||| || || ||||||||||| | |||| Sbjct 441510 AGAGTACGTCCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCGGGGGGA 441451 Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACT 41810 | || |||||||||| ||| || ||| | | | ||| | || ||||| |||| Sbjct 441450 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTATCGATG-----GTATCGCTGGACT 441396 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 | ||||| | || || || || || ||||| || || |||| Sbjct 441395 CAACCTCAAGGGTGATAGTCTTGCCAGTCAGGGTTTTGACGA 441354 Score = 102 bits (112), Expect = 8e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| |||| || |||||| || ||||| |||||||| Sbjct 441798 CCACCACGGAGACGGAGGACCAAGTGCAATGTAGACTCCTTTTGGATGTTGTAGTCGGAA 441739 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || || |||||||||||||| || || || |||||||| | || Sbjct 441738 AGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATGAGACGTTGTTGGTCAGGTGGG 441679 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||| || ||| || ||| || | || | ||||| || || | Sbjct 441678 ATACCCTCCTTATCTTGGATCTTGCTCTTTACATTGTCG--ATTGTGTCTGATGATTCAA 441621 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || || || ||||| ||||| |||||||| Sbjct 441620 CCTCCAGAGTGATAGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 441572 >seq3 Length=1995436 Score = 102 bits (112), Expect = 8e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | || || || || || ||||||||| ||||| ||||| Sbjct 1037772 ACCACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 1037831 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 |||||||| || | || ||||||||||| || ||||| ||||| ||||||||||| | Sbjct 1037832 CGAGAGGGTACGACCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGG 1037891 Query 41752 GGGAACGCTCTCCTTGTCCAT 41772 ||| | | ||||||||| || Sbjct 1037892 GGGGATACCCTCCTTGTCTAT 1037912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303514580800