Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq239 96.9 4e-15 >seq239 Length=742060 Score = 96.9 bits (106), Expect = 4e-15 Identities = 195/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||| ||||| || ||| | |||||||| ||||||||||| ||||| Sbjct 382063 ATGTAGGTATCAATGAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 382004 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | | ||||| || || ||| || ||| || Sbjct 382003 AAACCGTAGAAGCAGCGGGCCTCGGGGACCTGAACCTCACCGCTGAAGCGCTCCAGCAGG 381944 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| || || |||||| |||||||| || |||| | || ||||| || Sbjct 381943 TTCTCGTTGACAATACCGTCGGAAGCGGCGAAGAAGGCCAGAACGTGGGAGATGAAGTAA 381884 Query 17414 TTTTCGTC--CGGT-GTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 ||||| || | | | ||||||| | | ||| ||||| | ||| | ||| Sbjct 381883 CGCTCGTCATCGTTCAGGCGGTTGTGCCAGTCGTGCAGATCCTTGGACAGATCAATTTCC 381824 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 |||| |||||| ||| ||| | ||||| || ||||| | ||| || Sbjct 381823 TCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 381777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517540579807680