Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq670 141 1e-28 seq239 87.8 2e-12 >seq670 Length=422265 Score = 141 bits (156), Expect = 1e-28 Identities = 551/857 (64%), Gaps = 12/857 (1%) Strand=Plus/Minus Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764 |||| ||| |||| || || ||||| ||||||| || | || | | |||||| Sbjct 340174 GCAAGAGAAGCCAAGTTGCAGACGGCAACCTCATCAGGGGCGCTGTACTCGACAATCTCA 340115 Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824 ||||| || || | |||||| || | || | || || ||||| ||||| || Sbjct 340114 GTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA 340055 Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884 |||||||| || | ||||| || | ||||| || |||| | || | ||| || | | Sbjct 340054 GCATCCTTGTACAACATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGAATGGCATAC 339995 Query 53885 CAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGT--AT 53942 || | ||||||| || | || | | ||| ||| ||| | || Sbjct 339994 CACAGCTTCTGAGCCTTGATGGTC--TTACGGCCACGGCCCTCCTTCTCGTAGCGCTCAT 339937 Query 53943 ACA-ATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACAC 54001 ||| | ||| ||||||| || || | |||| | | | ||||| || | || || Sbjct 339936 ACAGAGCGT-CAAACTCATCACCGTAGACATCGGCAAGACCAGGGGCCTCGTGAGGGCAG 339878 Query 54002 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 54061 | || | ||| || |||| ||| || || ||||| |||||||| ||| |||| || Sbjct 339877 AACAGGGTCCAGTCACCGTTGGCCTCGACACGCTTCATGAAGAGATCGGGAGTCCACAGG 339818 Query 54062 GCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 54120 || ||| || ||||| | || | |||||| || || ||||| ||||| || Sbjct 339817 GC-ATAGAACAGATCACGGGCACGGACTTCCTCCTTACCGTGGTTCTTGCGGAGATCAAG 339759 Query 54121 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTT 54180 |||| | | | ||| | ||||| || |||| ||| |||| | | | || || || || Sbjct 339758 GAACTCGAAGACATCCGCGTGCCAGGGCTCCAGGTAGATGGCAAAAGCACCGGGACGCTT 339699 Query 54181 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 54240 ||| || ||||| || | ||| | |||||||| || || || | | ||| |||| || Sbjct 339698 GTTACCACCCTGGTCAACGTAGCGGGCGGTGTTGTTGTAGACCCGAAGCATGGGAACGAT 339639 Query 54241 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT 54300 ||| ||||| | || ||||| || | || ||| ||||||||||| | Sbjct 339638 ACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGAATTGGTGGCACGAATACGGTGGAC 339579 Query 54301 TGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 54360 ||||| || || || || | || ||||| | || || || | || ||||| Sbjct 339578 GTTCAGACCGATACCACCAGCAGTCTTGGAGATCATGGCACAAGTCTTGAGAGTGTCATA 339519 Query 54361 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 54420 ||| ||||| || || || ||| |||| | || || || || | || ||| | | Sbjct 339518 GATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAGGCCAGCTGGGGCTG 339459 Query 54421 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 54480 || | || || || | ||||| |||||||| || || | |||| ||| | | Sbjct 339458 CGGGGTGGCGGCGTTGAACAGAGTAGGGGAAGCGTGGGTGAAATACTTTTGAGACATCAA 339399 Query 54481 ATTGTACGTCTCGATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGC 54538 ||||| |||||||| || || |||| |||| ||||| || || || |||||| Sbjct 339398 GTTGTAGGTCTCGATGGCCTTTTCAATAT--CATTACCGTGAATACCCACAGCAACACGC 339341 Query 54539 ATTAACATGTGCTGAGG 54555 || | || ||||||||| Sbjct 339340 ATCAGCAGGTGCTGAGG 339324 >seq239 Length=742060 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 24149 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 24208 ||| ||||||||||| | || | |||||||| || || || |||||||| || || Sbjct 382378 GTGCAGACCCTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACC 382319 Query 24209 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 24268 |||||| || ||||| || || || || || || || || ||||| || || || || || Sbjct 382318 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGC 382259 Query 24269 CGCAAAGGCAA 24279 |||||||||| Sbjct 382258 GGCAAAGGCAA 382248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593715840900480