Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq239 232 7e-56 seq30 127 2e-24 seq195 125 7e-24 seq629 89.7 5e-13 >seq239 Length=742060 Score = 232 bits (256), Expect = 7e-56 Identities = 324/452 (72%), Gaps = 2/452 (0%) Strand=Plus/Plus Query 116984 AAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTG 117043 ||||| |||||||| |||| |||||| | | | | ||| || |||||| | |||||||| Sbjct 382187 AAGGCTGAGTGGGCTATGCGGTGGATCTCGGACCGTGAGTCCACCTTCGCCCAGCGCCTG 382246 Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 || ||||| || ||||||||||| ||||||| || ||| |||||| | || || ||| Sbjct 382247 GTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGG 382306 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163 |||||||| || || ||||||||||| ||||| ||| ||||||||| |||||| | ||| Sbjct 382307 CTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTGATCTCCCGTGAC 382366 Query 117164 GAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC 117223 ||||||||||| ||||||||||| |||| ||| || || | || || ||| Sbjct 382367 GAGGGTCTGCACACTGACTTTGCCTGCCTGCTCTTCTCCCACCTGAACAACCGCCCCAGC 382426 Query 117224 GCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACC 117283 | | || ||| || ||| ||| || |||| ||||||||| ||||| || Sbjct 382427 AAGCAGGTTGTTGAGGATGTCATCATCGAAGCCGTCGGTATCGAGCAGGAGTTCCTGACT 382486 Query 117284 GAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGA 117342 || || ||||| |||| ||| || || | || | | | ||||| || ||||| || Sbjct 382487 GATGCTCTGCC-CTGCGCTCTTCTCGGCATGAACTCCAAGCTGATGTGCCAGTACATAGA 382545 Query 117343 GTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAA 117402 ||||||||| ||| | || ||| ||| || | | | ||| |||| || | |||| Sbjct 382546 GTTCGTCGCTGACCGTCTTCTGGTCGCTCTCGGCAACAAGAAGTACTATAATGCCACCAA 382605 Query 117403 CCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||| | ||||| ||| | ||||||| ||| Sbjct 382606 CCCCTTCGACTTCATGGAGTCCATCTCCCTGG 382637 Score = 197 bits (218), Expect = 1e-45 Identities = 215/285 (75%), Gaps = 3/285 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || ||| Sbjct 381777 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTG 381836 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | ||||||| | ||| ||||||| ||||||| | |||||| Sbjct 381837 TCCAAGGATCTGCACGACTGGCACAACCGCCTGAACGATGACGAGCGTTACTTCATCTCC 381896 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| |||||||| |||||| || ||||||||||| ||| | ||||| Sbjct 381897 CACGTTCTGGCCTTCTTCGCCGCTTCCGACGGTATTGTCAACGAGAACCTGCTGGAGCGC 381956 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||||| ||||||| || ||||||||||| || |||||| ||| Sbjct 381957 TTCAGCGGTGAGGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGATG 382016 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | ||||| || | || || |||||| || || ||| Sbjct 382017 GAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGATACCTAC 382061 >seq30 Length=61855 Score = 127 bits (140), Expect = 2e-24 Identities = 139/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| |||||||||| | | ||||| | | Sbjct 52220 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 52279 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||| ||| | |||||||| || || Sbjct 52280 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCT 52338 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | ||||| || | |||||||||||||||||| Sbjct 52339 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 52398 Query 40878 GG 40879 || Sbjct 52399 GG 52400 >seq195 Length=318951 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| | || ||||| | || Sbjct 266966 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTCGAGTCTTCC 267025 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | ||| || || | ||||| |||||||| ||| | ||||| Sbjct 267026 GATACCATCGACAATGTGAAGAGCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 267085 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| ||||| ||||| || |||| ||||| || ||||||||| Sbjct 267086 CAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACACTATCTGACTACAAC 267145 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||| ||||| | ||| | ||| || | || || Sbjct 267146 ATCCAGAAGGAGTCCACCCTGCACTTGGTGCTCCGCCTGCGTGGTGG 267192 Score = 116 bits (128), Expect = 4e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| ||||| || |||||| | || || || ||| ||||| | | | | ||||| Sbjct 266442 TCACCGGCAAGACTATCACCCTTGAGGTGGAGTCCAGCGACACCATCGACAATGTCAAGT 266501 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || |||| ||||| ||||||||||| | |||||||| || || |||| ||| |||| Sbjct 266502 CCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGCCTGATCTTCGCCGGCA 266561 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || || | || |||||| |||||||||||| ||||||||| | || || | Sbjct 266562 AGCAGCTCGAGGATGGTCGTACCCTCTCCGACTACAACATTCAGAAGGAGTCTACTCTCC 266621 Query 40892 ATCTAGT 40898 | || || Sbjct 266622 ACCTGGT 266628 Score = 109 bits (120), Expect = 6e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || ||||| ||||||||| |||| || || | |||||| | | Sbjct 266748 TCGTCAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCG 266807 Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819 | | ||||| || || | || || ||||| || ||| | |||||||| || || | Sbjct 266808 ATAATGTCAAGTCGAAGATCCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGCCTGA 266867 Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 ||| || ||||| |||||||| || | || ||| | |||||||||||||||||||| Sbjct 266868 TCTTTGCTGGCAAGCAGCTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAGG 266927 Query 40880 AGGCCACGCTGCA 40892 | |||| ||||| Sbjct 266928 AATCCACCCTGCA 266940 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| || |||||| | || || || | | | Sbjct 267194 ATGCAGATCTTCGTTAAGACTTTGACCGGCAAGACAATCACCCTGGAGGTTGAGTCTAGC 267253 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| || || ||||| |||||| | ||||| Sbjct 267254 GATACCATTGACAACG-TCAAGTCCAAGATTCAAGATAAGGAGGGTATCCCCCCAGACCA 267312 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || || || ||||| || |||| |||||||| |||||||| Sbjct 267313 ACAGCGCCTGATCTTTGCTGGTAAGCAGCTTGAAGACGGCCGCACCCTGTCGGACTACAA 267372 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | || || || || || |||| Sbjct 267373 CATCCAGAAGGAGTCTACACTCCACCTGGTTCTGCG 267408 >seq629 Length=556044 Score = 89.7 bits (98), Expect = 5e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| || ||| | ||||| || || || |||| ||| ||||| ||||| || Sbjct 278663 GACAAGGAGGGTATTCCCCCAGACCAACAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAG 278604 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | ||||| || ||||||||||||||||||||| |||| || || || || | Sbjct 278603 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTCCTC 278544 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 278543 CGCCTGCGTGGTGGTGG 278527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515214202373760