Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq195 131 1e-25 seq30 89.7 3e-13 >seq195 Length=318951 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||||| ||| | || || ||||| ||||||||||| || Sbjct 267192 CCACCACGCAGGCGGAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAT 267133 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||||||||| ||||||||||| ||||| ||||| ||| Sbjct 267132 AGTGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGTTGGTCTGGGGGA 267073 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | ||||| || ||||| Sbjct 267072 ATGCCCTCCTTGTCTTGGATCTTGCTCTTCACATTGTCGATGGTATCGGAAGACTCGACC 267013 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| ||||| ||||| || || || || |||||||| Sbjct 267012 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 266966 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| |||||||| | ||| || ||||| ||||||||||| ||| Sbjct 267420 CCACCACGCAGACGCAGAACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCCGAC 267361 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || || || || || ||||| ||||| ||| Sbjct 267360 AGGGTGCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGG 267301 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||| || ||||| ||| | | | | || | |||| | || || || Sbjct 267300 ATACCCTCCTTATCTTGAATCTTGGACTTGACGTTGTCAATGGTATCGCTAGACTCAACC 267241 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || |||||||| | ||| || || ||||||||||| Sbjct 267240 TCCAGGGTGATTGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 267194 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | |||| || ||||| |||||||||||||| || ||| | || Sbjct 266631 AGGACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCATCC 266572 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || || ||||||||||| || | || ||||||||| Sbjct 266571 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 266512 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | ||| | || || || || | ||||| || Sbjct 266511 TGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCCACCTCAAGGGTGATAGTC 266452 Query 34358 TTGCCGGTGA 34367 |||||||||| Sbjct 266451 TTGCCGGTGA 266442 Score = 86.0 bits (94), Expect = 4e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| |||||||||||||||| |||| | || |||| ||||||||| || || Sbjct 266929 TTCCTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAA 266870 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || || ||||||||||| ||| | | |||||| || ||||| ||| | || Sbjct 266869 GATCAGGCGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGGATCTTCGACTTGACATT 266810 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | |||| || || || || | |||||||| ||||| || || || || || Sbjct 266809 ATCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGAC 266750 >seq30 Length=61855 Score = 89.7 bits (98), Expect = 3e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||| ||| ||| | || || | ||||||||| ||||| || Sbjct 52398 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 52339 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || ||||||||||| ||| | || ||||||||| ||||| ||| | | | | Sbjct 52338 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 52279 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | ||| |||| |||||||| | || ||||| || || || || || || || || Sbjct 52278 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 52220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323068944546560