Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq670 132 6e-26 seq239 102 1e-16 >seq670 Length=422265 Score = 132 bits (146), Expect = 6e-26 Identities = 549/856 (64%), Gaps = 10/856 (1%) Strand=Plus/Minus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| ||| |||| || || ||||| ||||||| || | || | | |||||| Sbjct 340174 GCAAGAGAAGCCAAGTTGCAGACGGCAACCTCATCAGGGGCGCTGTACTCGACAATCTCA 340115 Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 ||||| || || | ||| || || | || | || || ||||| ||||| || Sbjct 340114 GTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA 340055 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 |||||||| || | ||||| || | ||||| || |||||| || | ||| || | | Sbjct 340054 GCATCCTTGTACAACATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGAATGGCATAC 339995 Query 63123 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATA 63181 || | | || ||||||| || | | | | || | ||||| | ||| Sbjct 339994 CACA-GCTTCTGAGCCTTGATGGTCTTACGGCCACGGCCCTCCTTCTCGTAGCGCTCATA 339936 Query 63182 CA-ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACA 63240 || | ||| | ||||| || || | |||| | | | | ||| || | || || | Sbjct 339935 CAGAGCGT-CAAACTCATCACCGTAGACATCGGCAAGACCAGGGGCCTCGTGAGGGCAGA 339877 Query 63241 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63300 || | ||| || |||| ||| || || ||||| |||||||| ||| |||| || | Sbjct 339876 ACAGGGTCCAGTCACCGTTGGCCTCGACACGCTTCATGAAGAGATCGGGAGTCCACAGGG 339817 Query 63301 CTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63359 | ||| || ||||| | | | |||||| || || ||||| ||||| ||| Sbjct 339816 C-ATAGAACAGATCACGGGCACGGACTTCCTCCTTACCGTGGTTCTTGCGGAGATCAAGG 339758 Query 63360 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63419 ||| | | | ||| | ||||| || |||| ||| ||||| | | | || || || ||| Sbjct 339757 AACTCGAAGACATCCGCGTGCCAGGGCTCCAGGTAGATGGCAAAAGCACCGGGACGCTTG 339698 Query 63420 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63479 || || ||||| || | ||| | |||||||| || || || | | ||| |||| ||| Sbjct 339697 TTACCACCCTGGTCAACGTAGCGGGCGGTGTTGTTGTAGACCCGAAGCATGGGAACGATA 339638 Query 63480 CCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATT 63539 ||||| || || ||||| || | || ||| ||||||||||| | Sbjct 339637 CCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGAATTGGTGGCACGAATACGGTGGACG 339578 Query 63540 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAG 63599 ||||| || || || || | || ||||| | || || || | ||||||||| Sbjct 339577 TTCAGACCGATACCACCAGCAGTCTTGGAGATCATGGCACAAGTCTTGAGAGTGTCATAG 339518 Query 63600 ATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63659 || || || ||||| || || |||| | || || || || | || ||| | | Sbjct 339517 ATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAGGCCAGCTGGGGCTGC 339458 Query 63660 GTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63719 | || | || || || | ||||| |||||||| || || | |||| ||| | | Sbjct 339457 GGGGTGGCGGCGTTGAACAGAGTAGGGGAAGCGTGGGTGAAATACTTTTGAGACATCAAG 339398 Query 63720 TTGTACGTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCA 63777 ||||| ||||| || || || |||| |||| ||||| || || || ||||||| Sbjct 339397 TTGTAGGTCTCGATGGCCTTTTCAATAT--CATTACCGTGAATACCCACAGCAACACGCA 339340 Query 63778 TTAACATGTGCTGAGG 63793 | | || ||||||||| Sbjct 339339 TCAGCAGGTGCTGAGG 339324 >seq239 Length=742060 Score = 102 bits (112), Expect = 1e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | || | ||||| || || || || |||||||| || || Sbjct 382378 GTGCAGACCCTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACC 382319 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 |||||| || ||||| || || || ||||| || ||||| |||||||| || || || || Sbjct 382318 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGC 382259 Query 33716 AGCAAAGGCAA 33726 |||||||||| Sbjct 382258 GGCAAAGGCAA 382248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629811490769280