Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq670 147 3e-30 seq239 109 8e-19 >seq670 Length=422265 Score = 147 bits (162), Expect = 3e-30 Identities = 552/856 (64%), Gaps = 20/856 (2%) Strand=Plus/Minus Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCA 79679 ||| |||| || || ||||| ||||||| || | || | | || |||||||| Sbjct 340169 AGAAGCCAAGTTGCAGACGGCAACCTCATCAGGGGCGCTGTACTCGACAATCTCAGTGCA 340110 Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739 ||||| | ||||| || | || | || || ||||| ||||| || ||||| Sbjct 340109 CAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 340050 Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799 ||| || | ||||| || | ||||| || |||||| || | ||| || | ||| | Sbjct 340049 CTTGTACAACATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGAATGGCATACCACA- 339991 Query 79800 GACTC-GAGCCTTTAT-----TATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATA 79853 | || ||||||| || || | | | ||| || ||||| | ||| Sbjct 339990 GCTTCTGAGCCTTGATGGTCTTACGGCCACGGCCCTCCTTC-----TCGTAGCGCTCATA 339936 Query 79854 TA-ATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACA 79912 | | ||| | ||||| || || | |||||| | | ||||| |||| ||| || | Sbjct 339935 CAGAGCGT-CAAACTCATCACCGTAGACATCGGCAAGACCAGGGGCCTCGTGAGGGCAGA 339877 Query 79913 TCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 79972 || | ||| || || | ||| || || ||||| |||||||| ||| |||| || | Sbjct 339876 ACAGGGTCCAGTCACCGTTGGCCTCGACACGCTTCATGAAGAGATCGGGAGTCCACAGGG 339817 Query 79973 CTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 80031 | ||| || ||||| | || | ||||| || || ||||| ||||| ||| Sbjct 339816 C-ATAGAACAGATCACGGGCACGGACTTCCTCCTTACCGTGGTTCTTGCGGAGATCAAGG 339758 Query 80032 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTG 80091 ||| | | | ||| | ||||| || |||| ||| ||||| | | | || || || ||| Sbjct 339757 AACTCGAAGACATCCGCGTGCCAGGGCTCCAGGTAGATGGCAAAAGCACCGGGACGCTTG 339698 Query 80092 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 80151 || || ||||| || | ||| | |||||||| || || || | | ||| |||| ||| Sbjct 339697 TTACCACCCTGGTCAACGTAGCGGGCGGTGTTGTTGTAGACCCGAAGCATGGGAACGATA 339638 Query 80152 CCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATT 80211 || ||||| | || ||||| || | || ||| ||||||||||| | Sbjct 339637 CCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGAATTGGTGGCACGAATACGGTGGACG 339578 Query 80212 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 80271 ||||| || || || || | || ||||| | || || || | || |||||| Sbjct 339577 TTCAGACCGATACCACCAGCAGTCTTGGAGATCATGGCACAAGTCTTGAGAGTGTCATAG 339518 Query 80272 ATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 80331 || ||||| ||||| || || |||| | || || || || | || ||| | | Sbjct 339517 ATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAGGCCAGCTGGGGCTGC 339458 Query 80332 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 80391 || | || || || | ||||| |||||||| || || | |||| ||||| | Sbjct 339457 GGGGTGGCGGCGTTGAACAGAGTAGGGGAAGCGTGGGTGAAATACTTTTGAGACATCAAG 339398 Query 80392 TTGTACGTCTCAATAGCTGATTCTATATCCCATT--GATGAATTCCTACCGCGACACGCA 80449 ||||| ||||| || || ||| |||| |||| ||||| || || || ||||||| Sbjct 339397 TTGTAGGTCTCGATGGCCTTTTCAATAT--CATTACCGTGAATACCCACAGCAACACGCA 339340 Query 80450 TTAACATGTGCTGAGG 80465 | | || ||||||||| Sbjct 339339 TCAGCAGGTGCTGAGG 339324 >seq239 Length=742060 Score = 109 bits (120), Expect = 8e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033 ||||||||||||||| | || || |||||||| || || || |||||||| || || Sbjct 382378 GTGCAGACCCTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACC 382319 Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093 |||||| || ||||| || || || || || || || || |||||||| || || || || Sbjct 382318 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGC 382259 Query 50094 GGCAAAGGCAACAAG 50108 |||||||||||| || Sbjct 382258 GGCAAAGGCAACCAG 382244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718261832792640