Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq670 132 6e-26 seq239 96.9 5e-15 >seq670 Length=422265 Score = 132 bits (146), Expect = 6e-26 Identities = 549/856 (64%), Gaps = 10/856 (1%) Strand=Plus/Minus Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757 |||| ||| |||| || || ||||| ||||||| || || || | | ||| ||| Sbjct 340174 GCAAGAGAAGCCAAGTTGCAGACGGCAACCTCATCAGGGGCGCTGTACTCGACAATCTCA 340115 Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817 ||||| || || | |||||| || | || | || || ||||| ||||| || Sbjct 340114 GTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA 340055 Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877 |||||||| || | || || || | ||||| || |||||| || | ||| || | | Sbjct 340054 GCATCCTTGTACAACATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGAATGGCATAC 339995 Query 71878 CAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATA 71936 || | | || ||||||| || | || | | || | ||||| | ||| Sbjct 339994 CACA-GCTTCTGAGCCTTGATGGTCTTACGGCCACGGCCCTCCTTCTCGTAGCGCTCATA 339936 Query 71937 TA-ATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACA 71995 | | ||| | ||||| || || | ||| | | | ||||| || | || || | Sbjct 339935 CAGAGCGT-CAAACTCATCACCGTAGACATCGGCAAGACCAGGGGCCTCGTGAGGGCAGA 339877 Query 71996 TCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 72055 || | ||| || || | | | || || ||||| |||||||| ||| |||| || | Sbjct 339876 ACAGGGTCCAGTCACCGTTGGCCTCGACACGCTTCATGAAGAGATCGGGAGTCCACAGGG 339817 Query 72056 CTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 72114 | ||| || ||||| | || | ||||| || || ||||| ||||| ||| Sbjct 339816 C-ATAGAACAGATCACGGGCACGGACTTCCTCCTTACCGTGGTTCTTGCGGAGATCAAGG 339758 Query 72115 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTG 72174 ||| | | | ||| | ||||| || |||| ||| ||||| | | | || || || ||| Sbjct 339757 AACTCGAAGACATCCGCGTGCCAGGGCTCCAGGTAGATGGCAAAAGCACCGGGACGCTTG 339698 Query 72175 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 72234 || || ||||| || | ||| | |||||||| || || || | | ||| |||| ||| Sbjct 339697 TTACCACCCTGGTCAACGTAGCGGGCGGTGTTGTTGTAGACCCGAAGCATGGGAACGATA 339638 Query 72235 CCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATT 72294 || ||||| | || ||||| || | || ||| ||||||||||| | | Sbjct 339637 CCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGAATTGGTGGCACGAATACGGTGGACG 339578 Query 72295 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 72354 ||||| || || || || | || ||||| | || || || | || |||||| Sbjct 339577 TTCAGACCGATACCACCAGCAGTCTTGGAGATCATGGCACAAGTCTTGAGAGTGTCATAG 339518 Query 72355 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 72414 || ||||| || || || ||| |||| | || || || || | || ||| | | Sbjct 339517 ATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAGGCCAGCTGGGGCTGC 339458 Query 72415 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474 || | || || || | ||||| |||||||| || || | |||| ||||| | Sbjct 339457 GGGGTGGCGGCGTTGAACAGAGTAGGGGAAGCGTGGGTGAAATACTTTTGAGACATCAAG 339398 Query 72475 TTGTACGTCTCAATAGCTGATTCTATATCCCATT--GATGTATTCCTACCGCGACACGCA 72532 ||||| ||||| || || ||| |||| |||| || || || || || ||||||| Sbjct 339397 TTGTAGGTCTCGATGGCCTTTTCAATAT--CATTACCGTGAATACCCACAGCAACACGCA 339340 Query 72533 TTAACATATGCTGAGG 72548 | | || |||||||| Sbjct 339339 TCAGCAGGTGCTGAGG 339324 >seq239 Length=742060 Score = 96.9 bits (106), Expect = 5e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138 |||||||||||| || | || | |||||||| || || || |||||||| || || Sbjct 382378 GTGCAGACCCTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACC 382319 Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198 |||||| || ||||| || ||||| || || || || || |||||||| || || || || Sbjct 382318 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGC 382259 Query 42199 CGCAAAGGCAA 42209 |||||||||| Sbjct 382258 GGCAAAGGCAA 382248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671132689949760