Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq239 167 3e-36 seq670 150 3e-31 >seq239 Length=742060 Score = 167 bits (184), Expect = 3e-36 Identities = 335/493 (68%), Gaps = 23/493 (5%) Strand=Plus/Plus Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429 |||||| | |||| || ||||||||| ||| |||| | | |||| | | ||| Sbjct 382187 AAGGCTGAGTGGGCTATGCGGTGGATCTCGGACCGTGAGTCCACCTTCGCCCAGCGCCTG 382246 Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || || || |||||||| ||||| |||||||| || || || || | ||||| ||| Sbjct 382247 GTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTGG 382306 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 ||||||||||| || ||||||||||| ||||| | |||||| | || || || ||| Sbjct 382307 CTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTGATCTCCCGTGAC 382366 Query 125550 GAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAG- 125606 ||||| || ||| |||||||||| || || || || || || | | | ||| || Sbjct 382367 GAGGGTCTGCACACTGACTTTGCCTGCCTGCTCTTCTCCCACCTGAACAACCGCCCCAGC 382426 Query 125607 -TGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACA 125665 |||| | | ||| | |||||| | ||| ||||| | || || || Sbjct 382427 AAGCAGGT----TGTTGAGGATGTCATC---------ATCGAAGCCGTCGGTATCGAGCA 382473 Query 125666 AGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTG 125725 ||||| || || || | || || | | | |||||||||| |||||| ||||| Sbjct 382474 GGAGTTCCTGACTGATGCTCTGCCCTGCGCTCTTCTCGGCATGAACTCCAAGCTGATGTG 382533 Query 125726 CGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTA 125785 | ||||||||||||| || || || ||||| ||| || | ||| ||||| || Sbjct 382534 CCAGTACATAGAGTTCGTCGCTGACCGTCTTCTGGTCG---CTCTCGGCAACAAGAAGTA 382590 Query 125786 C---AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAA 125842 | || |||| || ||||| || |||||| ||| || || | || |||||||| Sbjct 382591 CTATAATGCCACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCAGGCAAGACCAA 382650 Query 125843 CTTTTTCGAGAAG 125855 ||| ||||||||| Sbjct 382651 CTTCTTCGAGAAG 382663 Score = 134 bits (148), Expect = 2e-26 Identities = 202/287 (70%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| ||||||| || ||||| | ||| || | |||||| Sbjct 381777 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTG 381836 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| ||| |||| ||| | | || ||| || ||||| | || || || Sbjct 381837 TCCAAGGATCTGCACGACTGGCACAACCGCCTGAACGATGACGAGCGTTACTTCATCTCC 381896 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| || |||||||||| |||| ||||| || || |||||||| || ||| || || Sbjct 381897 CACGTTCTGGCCTTCTTCGCCGCTTCCGACGGTATTGTCAACGAGAACCTGCTGGAGCGC 381956 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||| ||| | | || |||| ||||| ||||| ||||| |||||||| Sbjct 381957 TTCAGCGGTGAGGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGATG 382016 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||||| | ||||| || | |||||| || ||||| | ||||| Sbjct 382017 GAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGATACCTACAT 382063 >seq670 Length=422265 Score = 150 bits (166), Expect = 3e-31 Identities = 314/461 (68%), Gaps = 10/461 (2%) Strand=Plus/Plus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| || || || || || || ||| | ||| ||||| |||| || Sbjct 339675 CGCTACGTTGACCAGGGTGGTAACAAGCGTCCCGGTGCTTTTGCCATCTACCTGGAGCCC 339734 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 ||||||||||| || || || || | || | ||||| ||| || || || | Sbjct 339735 TGGCACGCGGATGTCTTCGAGTTCCTTGATCTCCGCAAGAACCACGGTAAGGAGGAAGTC 339794 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA- 97042 || ||| | || |||| ||||| || ||| || ||| | ||||||||||| ||| | Sbjct 339795 CGTGCCCGTGATCTGTTCTATGCCCTGTGGACTCCCGATCTCTTCATGAAGCGTGTCGAG 339854 Query 97043 --CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 | |||||| |||||| ||| | ||||| || | | || ||||| ||||| | Sbjct 339855 GCCAACGGTG---ACTGGACCCTGTTCTGCCCTCACGAGGCCCCTGGTCTTGCCGATGTC 339911 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAG 97159 | || || |||||||| || ||| | ||||||| | |||||||| ||| || Sbjct 339912 TACGGTGATGAGTTTGACGCTCTGTATGAGCGCTACGAGAAGGAGGGCCGTGGCCGTAAG 339971 Query 97160 ACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAA 97218 || | || | || | |||| |||||| | ||||| | ||||||| |||||||| | Sbjct 339972 ACCA-TCAAGGCTC-AGAAGCTGTGGTATGCCATTCTCGAGGCTCAGACCGAGACTGGCA 340029 Query 97219 CTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCA 97278 || | ||| | ||||||||| | || || |||||||| || |||| | Sbjct 340030 ACCCCTTCATGTTGTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGGTA 340089 Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||||| ||||||| |||||||| || ||||| |||||| Sbjct 340090 CCATCCGCAGCTCCAACCTGTGCACTGAGATTGTCGAGTAC 340130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741052011725760