Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq195 131 4e-25 >seq195 Length=318951 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || || || | |||||| || ||||| || || ||||| || || || | |||||| Sbjct 267405 AGAACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCT 267346 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || |||||||| || || | |||||| || || || || || || ||||| Sbjct 267345 TCAAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGGATACCCTCCTTATCT 267286 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || || || || | ||||||||||| || ||||| || || || ||| Sbjct 267285 TGAATCTTGGACTTGACGTTGTCAATGGTATCGCTAGACTCAACCTCCAGGGTGATTGTC 267226 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || | || || || || |||||||| Sbjct 267225 TTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 267194 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||||||||| || | |||||| || || || || || Sbjct 267162 GTGGACTCCTTCTGGATGTTGTAGTCAGATAGTGTGCGACCGTCCTCGAGCTGCTTGCCG 267103 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || ||||| || | |||||| || || || || || || || || || ||| ||||| || Sbjct 267102 GCGAAAATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATC-TTGCTCTT 267044 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||||||| || || ||||| | || || ||||| ||||| || || Sbjct 267043 CACATTGTCGATGGTATCGGAAGACTCGACCTCCAAAGTGATGGTCTTGCCAGTGAGGGT 266984 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 266983 CTTGACGAAAATCTGCAT 266966 Score = 109 bits (120), Expect = 1e-18 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || |||||||| || ||||| || || || | ||| || || || || || || Sbjct 266616 GTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCATCCTCGAGCTGCTTGCCG 266557 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || |||||||| || || || || ||||||||||| | || Sbjct 266556 GCGAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 266497 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| || | ||| ||||| | || ||||| || || |||||||| || || Sbjct 266496 ACATTGTCGATGGTGTCGCTGGACTCCACCTCAAGGGTGATAGTCTTGCCGGT 266444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151386952221408