Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq20 194 3e-45 seq554 179 6e-41 >seq20 Length=177415 Score = 194 bits (214), Expect = 3e-45 Identities = 206/269 (77%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| ||| || || |||||||| || ||||||||||| || | Sbjct 50053 CGCCAAGCGTCACCGCAAGAT-TCTGCGCGACAACATCCAGGGTATCACCAAGCCCGCCA 50111 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| ||||||||||| || ||||||||| |||| | || ||||||| |||| Sbjct 50112 TCCGCCGTCTTGCTCGTCGTGGCGGTGTCAAGCGTATCTCCGCTATGATCTATGAGGAGA 50171 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | |||| | ||| ||||||| || | || || | ||| ||| || || |||| Sbjct 50172 CCCGCGGTGTTCTCAAGTCCTTCCTCGAGTCTGTCATTCGTGACGCTGTCACTTACACCG 50231 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| |||||||| |||||||| |||| | |||||||| |||| || || | Sbjct 50232 AGCACGCTAAGCGTAAGACCGTCACCTCGCTGGACGTTGTCTATGCGCTGAAGCGCCAGG 50291 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | | || ||||| || ||||| Sbjct 50292 GCCGCACTCTGTACGGTTTCGGTGGTTAA 50320 >seq554 Length=699774 Score = 179 bits (198), Expect = 6e-41 Identities = 190/248 (77%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| |||| Sbjct 396443 CGCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCTA 396501 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| ||||| |||||||| ||||||||| |||| | || |||| || |||| Sbjct 396502 TCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 396561 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| ||||||| |||||| || || || | ||| ||| || ||| || | Sbjct 396562 CCCGTGGTGTCTTGAAGACCTTCCTTGAGGGTGTCATTCGTGACGCTGTCACCTACACTG 396621 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| || | || ||||||| || | || || || | Sbjct 396622 AGCACGCCAAGCGCAAGACCGTCACTTCTCTCGACGTCGTCTACGCTCTCAAGCGCCAGG 396681 Query 16671 GCCGTAAG 16678 |||||||| Sbjct 396682 GCCGTAAG 396689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074490497768