Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq670 147 3e-30 seq239 105 8e-18 >seq670 Length=422265 Score = 147 bits (162), Expect = 3e-30 Identities = 552/856 (64%), Gaps = 10/856 (1%) Strand=Plus/Minus Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951 |||| ||| |||| || || ||||| ||||||| || | || | | |||||| Sbjct 340174 GCAAGAGAAGCCAAGTTGCAGACGGCAACCTCATCAGGGGCGCTGTACTCGACAATCTCA 340115 Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011 ||||| || || | ||| || || | || | || || ||||| ||||| || Sbjct 340114 GTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA 340055 Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071 |||||||| || | ||||| || | ||||| || |||||| || | ||| || | | Sbjct 340054 GCATCCTTGTACAACATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGAATGGCATAC 339995 Query 63072 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATA 63130 || | | || ||||||| || | | | | || | ||||| | ||| Sbjct 339994 CACA-GCTTCTGAGCCTTGATGGTCTTACGGCCACGGCCCTCCTTCTCGTAGCGCTCATA 339936 Query 63131 CA-ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 63189 || | ||| | ||||| || || | |||| | | | ||||| || | || || | Sbjct 339935 CAGAGCGT-CAAACTCATCACCGTAGACATCGGCAAGACCAGGGGCCTCGTGAGGGCAGA 339877 Query 63190 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63249 || | ||| || |||| ||| || || ||||| |||||||| ||| |||| || | Sbjct 339876 ACAGGGTCCAGTCACCGTTGGCCTCGACACGCTTCATGAAGAGATCGGGAGTCCACAGGG 339817 Query 63250 CTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63308 | ||| || ||||| | || | |||||| || || ||||| ||||| ||| Sbjct 339816 C-ATAGAACAGATCACGGGCACGGACTTCCTCCTTACCGTGGTTCTTGCGGAGATCAAGG 339758 Query 63309 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63368 ||| | | | ||| | ||||| || |||| ||| ||||| | | | || || || ||| Sbjct 339757 AACTCGAAGACATCCGCGTGCCAGGGCTCCAGGTAGATGGCAAAAGCACCGGGACGCTTG 339698 Query 63369 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63428 || || ||||| || | ||| | |||||||| || || || | | ||| |||| ||| Sbjct 339697 TTACCACCCTGGTCAACGTAGCGGGCGGTGTTGTTGTAGACCCGAAGCATGGGAACGATA 339638 Query 63429 CCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATT 63488 ||||| || || ||||| || | || ||| ||||||||||| | Sbjct 339637 CCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGAATTGGTGGCACGAATACGGTGGACG 339578 Query 63489 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAG 63548 ||||| || || || || | || ||||| | || || || | ||||||||| Sbjct 339577 TTCAGACCGATACCACCAGCAGTCTTGGAGATCATGGCACAAGTCTTGAGAGTGTCATAG 339518 Query 63549 ATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63608 |||||||| ||||| || || |||| | || || || || | || ||| | | Sbjct 339517 ATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAGGCCAGCTGGGGCTGC 339458 Query 63609 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63668 || | || || || | ||||| |||||||| || || | |||| ||| | | Sbjct 339457 GGGGTGGCGGCGTTGAACAGAGTAGGGGAAGCGTGGGTGAAATACTTTTGAGACATCAAG 339398 Query 63669 TTGTACGTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCA 63726 ||||| ||||| || || || |||| |||| ||||| || || || ||||||| Sbjct 339397 TTGTAGGTCTCGATGGCCTTTTCAATAT--CATTACCGTGAATACCCACAGCAACACGCA 339340 Query 63727 TTAACATGTGCTGAGG 63742 | | || ||||||||| Sbjct 339339 TCAGCAGGTGCTGAGG 339324 >seq239 Length=742060 Score = 105 bits (116), Expect = 8e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | || || |||||||| || || || |||||||| || || Sbjct 382378 GTGCAGACCCTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACC 382319 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 |||||| || ||||| || || || ||||| || || || |||||||| || || || || Sbjct 382318 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGC 382259 Query 33438 AGCAAAGGCAA 33448 |||||||||| Sbjct 382258 GGCAAAGGCAA 382248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622941157412160