Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12-
19] 776 sequences; 39,803,164 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq588 140 2e-28
seq236 122 6e-23
>seq588
Length=9833
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2945 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3004
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 3005 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3039
>seq236
Length=491719
Score = 122 bits (134), Expect = 6e-23
Identities = 199/287 (69%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260
|||||||||||||| ||| | ||| ||||| | || || ||||| ||||||||
Sbjct 227107 TTCTACCGCTACAAGATGGAGAAAATCCAGTCCAAGATTGAAGGCAAGGGCAACGGTATC 227048
Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320
|| ||||||||||||||| |||| || ||| | | ||| | ||||||||| | |||
Sbjct 227047 AAGACCGTCATTGTCAACCTGCCCTCCGTTGCTCACTCCCTCAGCCGCCCTGCCGCGTAC 226988
Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380
| || |||||||| | |||||| || || ||| | | | | | | ||
Sbjct 226987 GTCATCAAGTATTTCGGTTTCGAACTCGGTGCCCAGGCCAATGCCAAGCCCTCCGATGAC 226928
Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440
|| | ||| | ||||| | || || | |||||||| ||||| | ||||| || ||
Sbjct 226927 CGTTGGATCATCAACGGTGCCCACGACGCCGCCAAGCTCCAGGATTACCTTGATGGGTTC 226868
Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||| |||||||||||| || | | ||| | ||||| ||||||||
Sbjct 226867 ATTTCCAAGTTTGTGCTTTGCAAGAAGTGCAAGAACCCCGAGACCGA 226821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334944032236856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |