Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq588 140 2e-28 seq236 122 6e-23 >seq588 Length=9833 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2945 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3004 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3005 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3039 >seq236 Length=491719 Score = 122 bits (134), Expect = 6e-23 Identities = 199/287 (69%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||||||||| ||| | ||| ||||| | || || ||||| |||||||| Sbjct 227107 TTCTACCGCTACAAGATGGAGAAAATCCAGTCCAAGATTGAAGGCAAGGGCAACGGTATC 227048 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || ||||||||||||||| |||| || ||| | | ||| | ||||||||| | ||| Sbjct 227047 AAGACCGTCATTGTCAACCTGCCCTCCGTTGCTCACTCCCTCAGCCGCCCTGCCGCGTAC 226988 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 | || |||||||| | |||||| || || ||| | | | | | | || Sbjct 226987 GTCATCAAGTATTTCGGTTTCGAACTCGGTGCCCAGGCCAATGCCAAGCCCTCCGATGAC 226928 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 || | ||| | ||||| | || || | |||||||| ||||| | ||||| || || Sbjct 226927 CGTTGGATCATCAACGGTGCCCACGACGCCGCCAAGCTCCAGGATTACCTTGATGGGTTC 226868 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||| |||||||||||| || | | ||| | ||||| |||||||| Sbjct 226867 ATTTCCAAGTTTGTGCTTTGCAAGAAGTGCAAGAACCCCGAGACCGA 226821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944032236856