Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq239 163 3e-35 seq195 100 3e-16 seq30 96.9 3e-15 >seq239 Length=742060 Score = 163 bits (180), Expect = 3e-35 Identities = 341/500 (68%), Gaps = 15/500 (3%) Strand=Plus/Plus Query 52344 AAGGCTCAGTGGGCAATGAAGTGGATCGAG-AGCGACACCGCCACGCTGGCCGAGCGCAT 52402 |||||| ||||||| ||| ||||||| | | || | |||| | ||| ||||| | Sbjct 382187 AAGGCTGAGTGGGCTATGCGGTGGATCTCGGACCGTGAGT-CCACCTTCGCCCAGCGCCT 382245 Query 52403 GGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTA 52462 ||| ||||| ||| |||||||| | || || |||||| ||| ||| | ||||| | Sbjct 382246 GGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATCTTCTG 382305 Query 52463 CATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGA 52522 | || | | || | |||||||| ||||| ||| ||||||| |||| || || || Sbjct 382306 GCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTGATCTCCCGTGA 382365 Query 52523 CGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATT 52582 ||| || |||||||| |||||||| ||||| || | | | | ||| | || Sbjct 382366 CGAGGGTCTGCACACTGACTTTGCCTGCCTGCTCTTCT---CCCACCTGAAC----AACC 382418 Query 52583 GGATTCGGA--CACGATCCTGAGCATGT--TCAAGGAGGCGGTGGCTATCGAAAAGGAGT 52638 | | | || | | |||| |||| ||| || || || | |||||| |||||| Sbjct 382419 GCCCCAGCAAGCAGGTTGTTGAGGATGTCATCATCGAAGCCGTCGGTATCGAGCAGGAGT 382478 Query 52639 TTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGT 52698 | | || | || ||||| || || || ||||||||| | || |||||| ||| Sbjct 382479 TCCTGACTGATGCTCTGCCCTGCGCTCTTCTCGGCATGAACTCCAAGCTGATGTGCCAGT 382538 Query 52699 ACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAAC 52757 |||| ||||| || || || ||||| |||| ||||| || | | ||||||| || Sbjct 382539 ACATAGAGTTCGTCGCTGACCGTCTTCTGGTCGCTCTCGG-CAACAAGAAGTACTATAAT 382597 Query 52758 GCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTC 52817 || ||| || || || || ||| | ||| || || | |||||||||||||| ||| Sbjct 382598 GCCACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCAGGCAAGACCAACTTCTTC 382657 Query 52818 GAGAAGCGAGTCGGCGAGTA 52837 |||||||| ||||| || || Sbjct 382658 GAGAAGCGTGTCGGTGACTA 382677 >seq195 Length=318951 Score = 100 bits (110), Expect = 3e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | || || || | | | |||||||| || ||||||||||| Sbjct 267192 CCACCACGCAGGCGGAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAG-- 267135 Query 138448 ATAGTACGCGA--GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 ||||| |||| ||||||||| || || |||| | || |||||||||||||| || | Sbjct 267134 ATAGTGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGTTGGTCTGGGG 267075 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCC 138564 | || || || ||||| ||| || || | ||||| | | ||| |||| ||||| Sbjct 267074 GAATGCCCTCCTTGTCTTGGATCTTGCTCTTCACATTGT-CGATGGTATCGGAAGACTCG 267016 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || || ||||| || || || || ||||||||||| Sbjct 267015 ACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 266966 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| ||| | || | | |||||||| || ||||||||||| | Sbjct 267420 CCACCACGCAGACGCAGAACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCCGAC 267361 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || || || ||||| | | |||| || ||||||||||| || || Sbjct 267360 AGGGTGCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGG 267301 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || || || ||| | || | || | ||| || | ||| ||| | ||||| | Sbjct 267300 ATACCCTCCTTATC-TTGAATCTTGGACTTGACGTTG-TCAATGGTATCGCTAGACTCAA 267243 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || |||| ||| || || || |||||||| Sbjct 267242 CCTCCAGGGTGATTGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 267194 Score = 87.8 bits (96), Expect = 2e-12 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | ||||| |||||||| || || |||| Sbjct 266613 GACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCATCCTCGAGCTGCTTGCCGGCG 266554 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| || ||||| ||||| ||||| || || || ||||| ||| | || | || Sbjct 266553 AAGATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTC-CTGAATCTTGGACTTGAC 266495 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTC 138569 |||| || | ||||||| | ||||||||||| Sbjct 266494 ATTG-TCGATGGTGTCGCTGGACTCCACCTC 266465 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | || ||||| || |||||||||||| | Sbjct 266964 CCACCACGGAGACGGAGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 266905 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| || || || || | | |||| || ||||| ||||| || || Sbjct 266904 AAGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGA 266845 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || || || ||| || || | | || | |||||||| ||||| ||| Sbjct 266844 ATACCCTCCTTATCCTGGATCTTCGACTTGACATTATCGATGGTGTCGGAAGACTCAACC 266785 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||| || | || || |||||||| || || || Sbjct 266784 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGAC 266750 >seq30 Length=61855 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| ||| || |||||||| || || |||| ||| Sbjct 52400 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 52341 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | || ||||| ||||| || || || || || ||||| || | || || || | ||| Sbjct 52340 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 52282 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 52281 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 52223 Query 138603 AAAA 138606 ||| Sbjct 52222 GAAA 52219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496257586254720