Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq195 120 7e-22 seq30 104 6e-17 seq629 96.9 8e-15 seq670 89.7 1e-12 >seq195 Length=318951 Score = 120 bits (132), Expect = 7e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| ||||||||||| |||||||| || | ||||||||| | | || Sbjct 266640 CGAAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTA 266581 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| ||||||||||| || ||||||||||| ||| || || Sbjct 266580 CGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGGATGCCC 266521 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| |||||| | | || || || | Sbjct 266520 TCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCCACCTCAAGG 266461 Query 199589 GTGATCGTCTTACCCGTGA 199607 ||||| ||||| || |||| Sbjct 266460 GTGATAGTCTTGCCGGTGA 266442 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || |||||||| |||| ||||||||||| | || | || || Sbjct 267177 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGATAGTGTGCGACCGTCC 267118 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||| ||||||||||| ||||| || ||| || || || Sbjct 267117 TCGAGCTGCTTGCCGGCGAAAATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 267058 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| ||| || | | || || ||||| ||||| ||| Sbjct 267057 TGGATCTTGCTCTTCACATTGTCGATGGTATCGGAAGACTCGACCTCCAAAGTGATGGTC 266998 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || ||||| || Sbjct 266997 TTGCCAGTGAGGGTCTTGACGAAAATCTG 266969 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || || ||||| |||| ||||||||| | ||| || | ||||| Sbjct 266949 AGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCC 266890 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || ||||| || ||||||||||| || ||| || || ||| Sbjct 266889 TCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGAATACCCTCCTTATCC 266830 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 266829 TGGATCTTCGACTTGACATTATCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 266770 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || || || || || || Sbjct 266769 TTGCCAGTCAGGGTCTTGAC 266750 >seq30 Length=61855 Score = 104 bits (114), Expect = 6e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| || ||| | ||||| || |||||||| |||||||||| Sbjct 52400 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 52341 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || ||||||||||| || ||| || || ||||| ||||| ||| ||| | Sbjct 52340 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 52281 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | || || ||||||||||| || || || || | Sbjct 52280 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 52221 Query 199620 AA 199621 || Sbjct 52220 AA 52219 >seq629 Length=556044 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || |||||||| |||| ||||||||| | | ||| | ||||| Sbjct 278545 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 278604 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| ||||||||||| |||||||| ||||| || Sbjct 278605 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGG 278645 >seq670 Length=422265 Score = 89.7 bits (98), Expect = 1e-12 Identities = 168/247 (68%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827 || |||||||| | |||||||| | ||| ||| | |||||| | | |||| | | Sbjct 340054 GCATCCTTGTACAACATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGAATGGCATAC 339995 Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887 || || | || || || | ||| | | | | || || || ||||| | |||||| Sbjct 339994 CACAGCTTCTGAGCCTTGATGGTCTTACGGCCACGGCCCTCCTTCTCGTAGCGCTCATAC 339935 Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947 || | || || || | ||||| | ||| ||||||| || || || | || || || Sbjct 339934 AGAGCGTCAAACTCATCACCGTAGACATCGGCAAGACCAGGGGCCTCGTGAGGGCAGAAC 339875 Query 167948 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 168007 || |||| | || | || |||||| | |||||||||||| |||| |||||| | || Sbjct 339874 AGGGTCCAGTCACCGTTGGCCTCGACACGCTTCATGAAGAGATCGGGAGTCCACAGGGCA 339815 Query 168008 TAGAACA 168014 ||||||| Sbjct 339814 TAGAACA 339808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178909878571992