Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq239 156 8e-33 seq670 100 5e-16 >seq239 Length=742060 Score = 156 bits (172), Expect = 8e-33 Identities = 341/514 (66%), Gaps = 7/514 (1%) Strand=Plus/Plus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTAC 25868 ||| |||| ||| | ||||| |||||| ||| ||||||| | | | | | | | || Sbjct 382172 CCCTGCATTAAGCGCAAGGCTGAGTGGGCTATGCGGTGGATCT-CGGACCGTGAGTCCAC 382230 Query 25869 GTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928 || | | |||| ||||| |||||||| || || ||||| ||||| ||| ||| || || Sbjct 382231 CTTCGCCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTT 382290 Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGA 25988 || | ||||||||||||||| || || ||||||||| ||| ||| |||||||| Sbjct 382291 CGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGA 382350 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA 26048 ||| ||| | | ||||||||||| |||| || |||||||||||||||| | | ||| Sbjct 382351 GCTGATCTCCCGTGACGAGGGTCTGCACACTGACTTTGCCTGCCTGCTCTTCTC---CCA 382407 Query 26049 CTTGCTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGA 26107 | || | || || |||| || || | | |||||| || || || | | Sbjct 382408 CCTGAACAAC-CGCCCCAGCAAGCAGGTTGTTGAGGATGTCATCATCGAAGCCGTCGGTA 382466 Query 26108 TCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGAC 26167 ||||| ||||||| | | ||||||||| || | Sbjct 382467 TCGAGCAGGAGTTCCTGACTGATGCTCTGCCCTGCGCTCTTCTCGGCATGAACTCCAAGC 382526 Query 26168 TCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCA 26227 | ||| |||| ||||| |||| || || |||| ||| ||| | || || | | Sbjct 382527 TGATGTGCCAGTACATAGAGTTCGTCGCTGACCGTCTTCTGGTCGCTCTCGGCAACAAGA 382586 Query 26228 GACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGA 26287 ||| | | | | ||||| |||||||| ||||| ||| || ||| ||| |||| Sbjct 382587 AGTACTATAATGCCACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCAGGCAAGA 382646 Query 26288 CCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||||||| || ||| | ||||| ||||| || Sbjct 382647 CCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 382680 Score = 107 bits (118), Expect = 4e-18 Identities = 165/234 (71%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||||||||| || ||||||||| Sbjct 381777 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTG 381836 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| || ||| |||| || || || | | ||||||| | || || Sbjct 381837 TCCAAGGATCTGCACGACTGGCACAACCGC-CTGAACGATGACGAGCGTTACTTCATCTC 381895 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| |||| ||||| || || || || ||||| || |||||||| ||| ||| | Sbjct 381896 CCACGTTCTGGCCTTCTTCGCCGCTTCCGACGGTATTGTCAACGAGAACCTGCTGGAGCG 381955 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | || || ||| | |||||| || ||||||||||||||||| Sbjct 381956 CTTCAGCGGTGAGGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGAT 382009 >seq670 Length=422265 Score = 100 bits (110), Expect = 5e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| ||||| ||||| || || | || || | | ||| | ||| || ||| | || Sbjct 340742 GTTGACCACCTGGAACTCACCAGCCAGGACACGGCGGGAGTAGATGTTGGAGGTGTAGGG 340683 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||| |||||||||||| | || ||||| ||||||||||| ||||| Sbjct 340682 CTCGAAGCACTCGTTGAAGCCCAGGATCTGGGAGGTACTGGCAGTGGGCATGGGAGCCAC 340623 Query 221236 CAGCAGACTGTTGCGCAGTCCGA 221258 ||||||||||||||| | |||| Sbjct 340622 CAGCAGACTGTTGCGAACACCGA 340600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928835790205440