Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq239 143 4e-28 seq670 118 2e-20 >seq239 Length=742060 Score = 143 bits (158), Expect = 4e-28 Identities = 214/299 (72%), Gaps = 5/299 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||||||||| || |||||||||||||| | || | Sbjct 381776 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATC 381834 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | || | | ||||| ||| ||| ||| |||||||| | |||||| Sbjct 381835 TGTCCAAGGATCTGCACGACTGGCACAACCGCCTGAACGATGACGAGCGTTACTTCATCT 381894 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| || ||||| || |||||| ||| || || || |||||||||| | Sbjct 381895 CCCACGTTCTGGCCTTCTT-CGCCGCTTCCGACGGTATTGTCAACGAGAACCTGCTGGAG 381953 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | ||||| || | || ||||| || | || ||||| ||||||||| Sbjct 381954 CGCTTCAGCGGTGAGGTTCAGGTCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATG 382013 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || ||||||||||| || |||||||| ||||| || || |||||| ||||||| || Sbjct 382014 ATGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGATACCTACATCAAGGAGCC 382072 Score = 113 bits (124), Expect = 6e-19 Identities = 178/250 (71%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 1456524 TCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGC 1456583 ||||| |||| ||||||| |||||| | ||||| | | || | ||||| || | Sbjct 382446 TCATCATCGAAGCCGTCGGTATCGAGCAGGAGTTCCTGACTGATGCTCTGCCCTGCGCTC 382505 Query 1456584 TCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCT 1456643 | ||||||||||| ||| ||| |||||||||||||| || || ||||| ||||| || Sbjct 382506 TTCTCGGCATGAACTCCAA-GCTGATGTGCCAGTACATAGAGTTC-GTCGCTGACCGTCT 382563 Query 1456644 GCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGG 1456703 || | || |||||| | ||||| |||| | ||||||| ||| | |||| Sbjct 382564 TCTGGTCGCTCTCGGCAACA-AGAAGTACTATAATGCCACCAACCCCTTCGACTTCATGG 382622 Query 1456704 AGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCA 1456762 ||| ||||| || | |||||||||||||| |||||| || || || || ||| | Sbjct 382623 AGTCCATCTCCCTGGCAGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGA 382682 Query 1456763 AGGCCGGCGT 1456772 ||||||| || Sbjct 382683 AGGCCGGTGT 382692 Score = 98.7 bits (108), Expect = 1e-14 Identities = 116/153 (76%), Gaps = 7/153 (5%) Strand=Plus/Plus Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCAACAAGGA--GGGCCTCGACACTTTGCCGAGCG 1456183 ||||| || ||||| ||| ||||||| ||| | | || || ||| ||| |||| Sbjct 382187 AAGGCTGAGTGGGCTATGCGGTGGATCTC---GGACCGTGAGTCCAC-CTTCGCCCAGCG 382242 Query 1456184 GCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTT 1456242 || || | ||||||||| |||||||| ||||| ||||| ||| ||| | | ||||| Sbjct 382243 CCTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATCTT 382302 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||||| || |||||||||||||| Sbjct 382303 CTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCT 382335 >seq670 Length=422265 Score = 118 bits (130), Expect = 2e-20 Identities = 199/288 (69%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954 ||||| || ||| |||||| || | || || || || || |||| ||| |||| Sbjct 339402 ATGTCTCAAAAGTATTTCACCCACGCTTCCCCTACTCTGTTCAACGCCGCCACCCCGCAG 339461 Query 259955 CCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTAT 260014 || ||| | || ||||| ||| | || ||||||| || || ||||| |||||| Sbjct 339462 CCCCAGCTGGCCTCTTGCTTCCTGGTTGATATGAAGGAGGACAGCATTGAGGGTATCTAT 339521 Query 260015 GACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA 260074 ||||| |||||| || || | ||||||||| | || || || |||||| | || Sbjct 339522 GACACTCTCAAGACTTGTGCCATGATCTCCAAGACTGCTGGTGGTATCGGTCTGAACGTC 339581 Query 260075 CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTT 260134 ||| | || ||| | ||||| | || || ||||||||| |||||||| | Sbjct 339582 CACCGTATTCGTGCCACCAATTCCTACATTGCTGGAACCAACGGCTCCTCCAACGGTATC 339641 Query 260135 GTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || ||||||||||| || | ||| |||| || |||||||| |||||| Sbjct 339642 GTTCCCATGCTTCGGGTCTACAACAACACCGCCCGCTACGTTGACCAG 339689 Score = 107 bits (118), Expect = 3e-17 Identities = 283/431 (66%), Gaps = 14/431 (3%) Strand=Plus/Plus Query 261806 GGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTGGCTGGACCTC 261865 || || |||||| ||||||||| || |||||||| || || || | | || || ||| Sbjct 339708 GGTGCTTTTGCCATCTACCTGGAGCCCTGGCACGCGGATGTCTTCGAGTTCCTTGATCTC 339767 Query 261866 AAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTTTTACGGCCTG 261925 ||||||||||| |||| ||| ||| || || | |||| || || | |||| Sbjct 339768 CGCAAGAACCACGGTAAGGA----GGAAGTCCGTGCCCGTG--ATCTGTTCTATGCCCTG 339821 Query 261926 TGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTCGCTCTTTTGC 261985 ||||| ||| || || ||| || | | | || | | |||||| | || || ||| Sbjct 339822 TGGACTCCCGATCTCTTCATGAAGCGTGTCGAGGCCAACGGTGACTGGACCCTGTTCTGC 339881 Query 261986 CCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGCCCTCTATGAG 262045 || |||||| || || || ||| ||| || | | |||||||| || |||||| Sbjct 339882 CCTCACGAGGCCCCTGGTCTTGCCGATGTCTACGGTGATGAGTTTGACGCTCTGTATGAG 339941 Query 262046 NNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCCGCACGACAGATCTGGTCG 262102 || |||| || | | || || || | |||| Sbjct 339942 CGCTACGAGAAGGAGGGCCGTGGCCGTAAGACCATCAAGGCT-CA-GA-AGCTGTGGTAT 339998 Query 262103 GCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGGACGCCGTC 262162 |||||| ||| ||| || | |||||| |||| |||| |||| | |||||||| || | Sbjct 339999 GCCATTCTCGAGGCTCAGACCGAGACTGGCAACCCCTTCATGTTGTACAAGGATGCTTGC 340058 Query 262163 AACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGAGGCCAACCTGTGCACCGA 262221 ||| || ||||||||| |||||||||| |||| | ||| ||||||||||||| || Sbjct 340059 AACAAGAAGAGCAACCAGAAGAACCTGGGTACCATCCGCAGCT-CCAACCTGTGCACTGA 340117 Query 262222 GATCGTCCAGT 262232 ||| ||| ||| Sbjct 340118 GATTGTCGAGT 340128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177736353373712