Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq195 149 1e-30 seq30 122 2e-22 seq629 116 9e-21 seq670 102 2e-16 >seq195 Length=318951 Score = 149 bits (164), Expect = 1e-30 Identities = 153/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| ||||| ||||| || || ||||| || || | ||||| Sbjct 266641 ACGAAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 266582 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| |||||||| ||||| || ||||||||||| | || Sbjct 266581 ACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGGATGCC 266522 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| || || || ||||||||||| | || ||||| || Sbjct 266521 CTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCCACCTCAAG 266462 Query 211073 AGTGATCGTCTTTCCCGTGA 211092 ||||| ||||| || |||| Sbjct 266461 GGTGATAGTCTTGCCGGTGA 266442 Score = 149 bits (164), Expect = 1e-30 Identities = 153/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || ||||| || || |||||||| || || | | ||| | ||||| Sbjct 266949 AGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCC 266890 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| ||||| || ||||| || |||| || ||||| ||| Sbjct 266889 TCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGAATACCCTCCTTATCC 266830 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| || ||||||||||| ||||| ||| Sbjct 266829 TGGATCTTCGACTTGACATTATCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 266770 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || || ||||| || Sbjct 266769 TTGCCAGTCAGGGTCTTGAC 266750 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || |||||||| || |||||||| || || | || || | || || Sbjct 267177 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGATAGTGTGCGACCGTCC 267118 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || || || |||||||| || |||| || |||||||| Sbjct 267117 TCGAGCTGCTTGCCGGCGAAAATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 267058 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || |||||||| || || || ||||| | |||||| ||| Sbjct 267057 TGGATCTTGCTCTTCACATTGTCGATGGTATCGGAAGACTCGACCTCCAAAGTGATGGTC 266998 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 266997 TTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 266966 >seq30 Length=61855 Score = 122 bits (134), Expect = 2e-22 Identities = 137/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || || || | ||||| || ||||||||||| |||||||| Sbjct 52398 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 52339 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || ||||| || |||| || ||||||||||||||||| || ||||| ||| Sbjct 52338 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 52279 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 52278 ATGGTGTC---GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 52222 Query 211104 AA 211105 || Sbjct 52221 AA 52220 >seq629 Length=556044 Score = 116 bits (128), Expect = 9e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| |||||||| || |||||||| || |||| ||| || | ||||| Sbjct 278545 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 278604 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| || || |||||||| || |||| || |||||||| Sbjct 278605 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGAATACCCTCCTTGTC 278663 >seq670 Length=422265 Score = 102 bits (112), Expect = 2e-16 Identities = 189/276 (68%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||||||||| || ||| ||||| |||||| |||||||| | || Sbjct 340082 GTTCTTCTGGTTGCTCTTCTTGTTGCAA---GCATCCTTGTACAACATGAAGGGGTTGCC 340026 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||| | |||||| |||||||| || ||| |||| ||| || || ||||| Sbjct 340025 AGTCTCGGTCTGAGCCTCGAGAATGGCATACCACAGCTTCTGAGCCTTGATGGTCTTACG 339966 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | | || || |||||||| | || || | || || || || |||||||| Sbjct 339965 GCCACGGCCCTCCTTCTCGTAGCGCTCATACAGAGCGTCAAACTCATCACCGTAGACATC 339906 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | ||||| || ||||| | |||||||| || |||| | ||||| ||| || || Sbjct 339905 GGCAAGACCAGGGGCCTCGTGAGGGCAGAACAGGGTCCAGTCACCGTTGGCCTCGACACG 339846 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 ||||||||||| || | ||||| | ||||||||| Sbjct 339845 CTTCATGAAGAGATCGGGAGTCCACAGGGCATAGAA 339810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159140475131240