Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq195 140 8e-28 seq77 109 1e-18 seq30 102 2e-16 >seq195 Length=318951 Score = 140 bits (154), Expect = 8e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| || |||||||| || |||| ||||| |||| ||| || | ||||| Sbjct 266949 AGGACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCC 266890 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || |||||||| ||||| || Sbjct 266889 TCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGGGGAATACCCTCCTTATCC 266830 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || | || || || | ||||| ||| Sbjct 266829 TGGATCTTCGACTTGACATTATCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 266770 Query 225682 TTGCCCGTCA 225691 ||||| |||| Sbjct 266769 TTGCCAGTCA 266760 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| ||||||||||| || || || || | ||||| |||| | || Sbjct 266641 ACGAAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 266582 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || || || || Sbjct 266581 ACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGAGGGATGCC 266522 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| ||| ||||||||||| || ||||| || | Sbjct 266521 CTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCCACCTCAAG 266462 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 266461 GGTGATAGTCTTGCCGGT 266444 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || ||||| || || |||| ||||| || | | || | || || Sbjct 267177 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGATAGTGTGCGACCGTCC 267118 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || || || |||||||| || ||||| || ||||||||| Sbjct 267117 TCGAGCTGCTTGCCGGCGAAAATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 267058 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| |||||||| || || | || || || || ||||| ||| Sbjct 267057 TGGATCTTGCTCTTCACATTGTCGATGGTATCGGAAGACTCGACCTCCAAAGTGATGGTC 266998 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 266997 TTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 266966 >seq77 Length=26963 Score = 109 bits (120), Expect = 1e-18 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 7566 TATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGG 7625 ||||||||| || ||||| | | |||||||||||| | |||||||| | | | ||||| Sbjct 16378 TATTATTACAGCTCATGCTATAATGATGATTTTCTTTATGGTTATGCCAGCTTTAATAGG 16437 Query 7626 CGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAG 7685 ||||| || |||| || | || ||| | |||||| ||| |||||||| || ||||| Sbjct 16438 TGGTTTTGGTAATTTCTTATTACCATTATTAGTTGGTGGTCCAGATATGGCATTCCCAAG 16497 Query 7686 GCTTAACAATATAAGTTTTTGATTACTA 7713 | || ||||||||||| |||||| || Sbjct 16498 ATTAAATAATATAAGTTTCTGATTATTA 16525 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| || || || ||||||||||| ||||| | | ||||||||| ||||| || | Sbjct 16936 TTCAGGGTGTCCGAAGAATCAGAATAAGTGTTGGAATAAGATAGGATCACCTCCACCAGC 16877 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 | ||||| || ||||||||| |||||||||||||| Sbjct 16876 TACTTCAAAGAATGAAGTATTAAAGTTTCTATCAGTTAA 16838 >seq30 Length=61855 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || ||| | ||||| || |||||||| || |||||||| Sbjct 52398 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 52339 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || |||||||| |||||||| ||| || ||| Sbjct 52338 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 52279 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 52278 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 52220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192519343258544